RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 HMGB4Q8WW32 186 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 RLN3Q8WXF3 142 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 TAF4BQ92750 862 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 CSNK1G1Q9HCP0 422 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 SPHK2Q9NRA0 654 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 DMAC2Q9NW81 257 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 GMIPQ9P107 970 aa18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 TNRC6BQ9UPQ9 1833 aaKnown RBP18.63■□□□□ 0.57
CCDC144B-204ENST00000455629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 TCRBV21S2A2A0A5A6 115 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 VNN1O95497 513 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 ZNF252P-AS1Q0IIN9 211 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 ANO4Q32M45 955 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 TRIM61Q5EBN2 209 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 SCARA5Q6ZMJ2 495 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 UNC93AQ86WB7 457 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 TMEFF1Q8IYR6 380 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 CRYBG2Q8N1P7 616 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 PGBD3Q8N328 593 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 ZNF513Q8N8E2 541 aaPredicted RBP18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 NAT16Q8N8M0 369 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 NUSAP1Q9BXS6 441 aaKnown RBP18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 SDCBP2Q9H190 292 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 TLR8Q9NR97 1041 aaKnown RBP18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 MBD1Q9UIS9 605 aaPredicted RBP18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 MYH10P35580 1976 aa18.62■□□□□ 0.57
CCDC144B-204ENST00000455629 PI4KAP42356 2102 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 GIPC1O14908 333 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 TLR5O60602 858 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 TRIM21P19474 475 aaKnown RBP18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 HOXD12P35452 270 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 PTGER3P43115 390 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 DPYDQ12882 1025 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 STK4Q13043 487 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 PNOCQ13519 176 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 ZACNQ401N2 412 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 HTR3DQ70Z44 454 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 TMEM25Q86YD3 366 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 TERB1Q8NA31 727 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 ZMIZ2Q8NF64 920 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 SLC2A14Q8TDB8 520 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 SMOQ99835 787 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 CLSTN2Q9H4D0 955 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 ZDHHC4Q9NPG8 344 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 EXOC1Q9NV70 894 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 HOOK1Q9UJC3 728 aaKnown RBP18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 STARD13Q9Y3M8 1113 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 ZFHX4Q86UP3 3567 aa18.61■□□□□ 0.57
CCDC144B-204ENST00000455629 GON4LQ3T8J9 2241 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 PDXKO00764 312 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 IKBKBO14920 756 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 KLRC4O43908 158 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 PROS1P07225 676 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 CCDC130P13994 396 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 NDST1P52848 882 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 GOLGA8FQ08AF8 430 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 GOLGA8DPQ0D2H9 430 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 NFKBIBQ15653 356 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 C10orf76Q5T2E6 689 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 PEAR1Q5VY43 1037 aaPredicted RBP18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 LYSMD4Q5XG99 296 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 SLC23A3Q6PIS1 610 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 FRMD1Q8N878 549 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 KIAA0895Q8NCT3 520 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 TMC2Q8TDI7 906 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 KCTD10Q9H3F6 313 aa18.6■□□□□ 0.57
CCDC144B-204ENST00000455629 ASCC3Q8N3C0 2202 aaKnown RBP18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 ZBTB24O43167 697 aaPredicted RBP18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 AP5Z1O43299 807 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 BEST1O76090 585 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 ASS1P00966 412 aaKnown RBP18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 NR3C1P04150 777 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 IRF1P10914 325 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 HOXB2P14652 356 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 NTSR1P30989 418 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 MAP3K7CLP57077 242 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 DLG4P78352 724 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 CAMK4Q16566 473 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 UAP1L1Q3KQV9 507 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 GRAMD4Q6IC98 578 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 SLC36A4Q6YBV0 504 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 SV2AQ7L0J3 742 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 ARMCX6Q7L4S7 300 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 WBP2Q969T9 261 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 ELMO3Q96BJ8 720 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 XPO6Q96QU8 1125 aaKnown RBP18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 KLF16Q9BXK1 252 aaPredicted RBP18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 CYLDQ9NQC7 956 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 TMEM74BQ9NUR3 256 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 WDR35Q9P2L0 1181 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 LSM7Q9UK45 103 aaKnown RBP18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 PILRBQ9UKJ0 227 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 CEP192Q8TEP8 1941 aa18.59■□□□□ 0.57
CCDC144B-204ENST00000455629 CACNG3O60359 315 aa18.58■□□□□ 0.56
CCDC144B-204ENST00000455629 GREM1O60565 184 aa18.58■□□□□ 0.56
CCDC144B-204ENST00000455629 FAM200BP0CF97 657 aa18.58■□□□□ 0.56
CCDC144B-204ENST00000455629 GABRG2P18507 467 aa18.58■□□□□ 0.56
CCDC144B-204ENST00000455629 ATP5C1P36542 298 aaKnown RBP18.58■□□□□ 0.56
CCDC144B-204ENST00000455629 ASPAP45381 313 aa18.58■□□□□ 0.56
CCDC144B-204ENST00000455629 PGFP49763 221 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms