RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 LRRC3Q9BY71 257 aa17.43■□□□□ 0.38
LINC00963-208ENST00000454968 ABCC13Q9NSE7 274 aa17.43■□□□□ 0.38
LINC00963-208ENST00000454968 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00963-208ENST00000454968 LMCD1Q9NZU5 365 aa17.43■□□□□ 0.38
LINC00963-208ENST00000454968 SZT2Q5T011 3432 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 LRCH4O75427 683 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 ZMYND10O75800 440 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 PRLRP16471 622 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 EPHB3P54753 998 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 YWHAGP61981 247 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC00963-208ENST00000454968 AMPD2Q01433 879 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 TAF10Q12962 218 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 LRRC38Q5VT99 294 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 SYPL2Q5VXT5 272 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 MSANTD2Q6P1R3 559 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 DNAJB7Q7Z6W7 309 aaPredicted RBP17.42■□□□□ 0.38
LINC00963-208ENST00000454968 CPNE8Q86YQ8 564 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 PDZD8Q8NEN9 1154 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 GIPC2Q8TF65 315 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 NCAPGQ9BPX3 1015 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 ZNF576Q9H609 170 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 OSER1Q9NX31 292 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 DNAI1Q9UI46 699 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 COLQQ9Y215 455 aaPredicted RBP17.42■□□□□ 0.38
LINC00963-208ENST00000454968 HCFC2Q9Y5Z7 792 aa17.42■□□□□ 0.38
LINC00963-208ENST00000454968 MIF4GDA9UHW6 222 aaKnown RBP17.41■□□□□ 0.38
LINC00963-208ENST00000454968 TADA3O75528 432 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 HNRNPA1P09651 372 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC00963-208ENST00000454968 SPATA31D3P0C874 917 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 POU3F3P20264 500 aaPredicted RBP17.41■□□□□ 0.38
LINC00963-208ENST00000454968 PSMA2P25787 234 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 CTNNA2P26232 953 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 SDC4P31431 198 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 CTNNA1P35221 906 aaKnown RBP17.41■□□□□ 0.38
LINC00963-208ENST00000454968 PPP3CCP48454 512 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 PEX5P50542 639 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 EPHA5P54756 1037 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 RNASE9P60153 205 aaKnown RBP17.41■□□□□ 0.38
LINC00963-208ENST00000454968 VEPH1Q14D04 833 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 PTPROQ16827 1216 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 TMEM184AQ6ZMB5 413 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 SPATA31D4Q6ZUB0 917 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 CYP4V2Q6ZWL3 525 aaPredicted RBP17.41■□□□□ 0.38
LINC00963-208ENST00000454968 PEX26Q7Z412 305 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 TMEM150AQ86TG1 271 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 ITIH5Q86UX2 942 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 TMC8Q8IU68 726 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 FBXO32Q969P5 355 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 FAM149B1Q96BN6 582 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 CFAP57Q96MR6 1250 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 NAPGQ99747 312 aaPredicted RBP17.41■□□□□ 0.38
LINC00963-208ENST00000454968 IL21Q9HBE4 155 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 TMEM51Q9NW97 253 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 ZDHHC7Q9NXF8 308 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 GMIPQ9P107 970 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 CALCOCO1Q9P1Z2 691 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 DPP7Q9UHL4 492 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 AMFRQ9UKV5 643 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 NAALADL1Q9UQQ1 740 aa17.41■□□□□ 0.38
LINC00963-208ENST00000454968 A0A1W2PQH9 124 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 DDX3YO15523 660 aaKnown RBP17.4■□□□□ 0.38
LINC00963-208ENST00000454968 FTCDO95954 541 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 ATP1A1P05023 1023 aaKnown RBP17.4■□□□□ 0.38
LINC00963-208ENST00000454968 EPCAMP16422 314 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 CA8P35219 290 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 TUBP50607 506 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 HDAC4P56524 1084 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 SLC25A11Q02978 314 aaKnown RBP17.4■□□□□ 0.38
LINC00963-208ENST00000454968 POLNQ7Z5Q5 900 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 SLITRK1Q96PX8 696 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 SMOC2Q9H3U7 446 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 MAN1C1Q9NR34 630 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 TLR8Q9NR97 1041 aaKnown RBP17.4■□□□□ 0.38
LINC00963-208ENST00000454968 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.4■□□□□ 0.38
LINC00963-208ENST00000454968 UXTQ9UBK9 157 aaPredicted RBP17.4■□□□□ 0.38
LINC00963-208ENST00000454968 STAP1Q9ULZ2 295 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 PCDHA3Q9Y5H8 950 aa17.4■□□□□ 0.38
LINC00963-208ENST00000454968 PRRC2BQ5JSZ5 2229 aaKnown RBP17.4■□□□□ 0.38
LINC00963-208ENST00000454968 CCDC66A2RUB6 948 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 CTAGE9A4FU28 777 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 ZNF840PA6NDX5 716 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 RFXAPO00287 272 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 PSTPIP1O43586 416 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 F11P03951 625 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 TFE3P19532 575 aaPredicted RBP17.39■□□□□ 0.38
LINC00963-208ENST00000454968 TAS2R40P59535 323 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 PITX1P78337 314 aaPredicted RBP17.39■□□□□ 0.38
LINC00963-208ENST00000454968 C15orf59Q2T9L4 293 aaPredicted RBP17.39■□□□□ 0.38
LINC00963-208ENST00000454968 DCAF6Q58WW2 860 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 SH3PXD2AQ5TCZ1 1133 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 CC2D1AQ6P1N0 951 aaPredicted RBP17.39■□□□□ 0.38
LINC00963-208ENST00000454968 KLHDC10Q6PID8 442 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 GOLGA1Q92805 767 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 TTYH1Q9H313 450 aaPredicted RBP17.39■□□□□ 0.38
LINC00963-208ENST00000454968 TLE6Q9H808 572 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 HYOU1Q9Y4L1 999 aa17.39■□□□□ 0.38
LINC00963-208ENST00000454968 C2orf16Q68DN1 1984 aa17.39■□□□□ 0.37
LINC00963-208ENST00000454968 CES2O00748 559 aa17.38■□□□□ 0.37
LINC00963-208ENST00000454968 ENC1O14682 589 aa17.38■□□□□ 0.37
LINC00963-208ENST00000454968 PER2O15055 1255 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms