RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 PPIL6Q8IXY8 311 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 PDIK1LQ8N165 341 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 PYROXD2Q8N2H3 581 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 CCDC185Q8N715 623 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 C3orf58Q8NDZ4 430 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 HSFY1Q96LI6 401 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 ULBP1Q9BZM6 244 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 ADAM7Q9H2U9 754 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 ADAMTS4O75173 837 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 AMPD1P23109 780 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 RBL1P28749 1068 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 ATP5DP30049 168 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 GSCP56915 257 aaPredicted RBP14.22□□□□□ -0.13
CLK3-203ENST00000454830 YWHAZP63104 245 aaKnown RBP14.22□□□□□ -0.13
CLK3-203ENST00000454830 DEFB115Q30KQ5 88 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 SLC26A9Q7LBE3 791 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 NLRP14Q86W24 1093 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 CCNYQ8ND76 341 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 EDEM1Q92611 657 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 PGM2Q96G03 612 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 TRPV6Q9H1D0 765 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 EPN3Q9H201 632 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 TMPRSS4Q9NRS4 437 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 PRDM4Q9UKN5 801 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 EFR3BQ9Y2G0 817 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 XPO1O14980 1071 aaKnown RBP14.22□□□□□ -0.13
CLK3-203ENST00000454830 MGEA5O60502 916 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 WARSP23381 471 aaKnown RBP14.22□□□□□ -0.13
CLK3-203ENST00000454830 PTPN7P35236 360 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 YWHAGP61981 247 aaKnown RBP eCLIP14.22□□□□□ -0.13
CLK3-203ENST00000454830 PITX1P78337 314 aaPredicted RBP14.22□□□□□ -0.13
CLK3-203ENST00000454830 RNF187Q5TA31 235 aaPredicted RBP14.22□□□□□ -0.13
CLK3-203ENST00000454830 STK32AQ8WU08 396 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 CNOT10Q9H9A5 744 aaKnown RBP14.22□□□□□ -0.13
CLK3-203ENST00000454830 CHST12Q9NRB3 414 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 STAP1Q9ULZ2 295 aa14.22□□□□□ -0.13
CLK3-203ENST00000454830 A0A087WUV0 522 aaPredicted RBP14.21□□□□□ -0.13
CLK3-203ENST00000454830 USP17L7P0C7H9 530 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 NCAM1P13591 858 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 HOXD10P28358 340 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 LHX1P48742 406 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 CAP1Q01518 475 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 DEUP1Q05D60 604 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 TIGD5Q53EQ6 642 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 BSPRYQ5W0U4 402 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 PCGF5Q86SE9 256 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 PLD5Q8N7P1 536 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 PCDH19Q8TAB3 1148 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 GDAP1Q8TB36 358 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 PCED1BQ96HM7 432 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 CCT8L2Q96SF2 557 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 HNRNPABQ99729 332 aaKnown RBP14.21□□□□□ -0.13
CLK3-203ENST00000454830 CHMP2BQ9UQN3 213 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 PRG3Q9Y2Y8 225 aaPredicted RBP14.21□□□□□ -0.13
CLK3-203ENST00000454830 TRPM7Q96QT4 1865 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 APRTP07741 180 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 LRPAP1P30533 357 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 RNASEH2BQ5TBB1 312 aaKnown RBP14.21□□□□□ -0.13
CLK3-203ENST00000454830 CCDC110Q8TBZ0 833 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 KHSRPQ92945 711 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLK3-203ENST00000454830 ROPN1BQ9BZX4 212 aaPredicted RBP14.21□□□□□ -0.13
CLK3-203ENST00000454830 ROPN1Q9HAT0 212 aaPredicted RBP14.21□□□□□ -0.13
CLK3-203ENST00000454830 CRTAC1Q9NQ79 661 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 GIT1Q9Y2X7 761 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 NR2E3Q9Y5X4 410 aa14.21□□□□□ -0.13
CLK3-203ENST00000454830 BRAFP15056 766 aa14.21□□□□□ -0.14
CLK3-203ENST00000454830 CREB1P16220 341 aa14.21□□□□□ -0.14
CLK3-203ENST00000454830 BDNFP23560 247 aa14.21□□□□□ -0.14
CLK3-203ENST00000454830 SSTR1P30872 391 aa14.21□□□□□ -0.14
CLK3-203ENST00000454830 XKR4Q5GH76 650 aa14.21□□□□□ -0.14
CLK3-203ENST00000454830 CLEC20AQ6ZU45 233 aa14.21□□□□□ -0.14
CLK3-203ENST00000454830 HFE2Q6ZVN8 426 aa14.21□□□□□ -0.14
CLK3-203ENST00000454830 GSTCDQ8NEC7 633 aa14.21□□□□□ -0.14
CLK3-203ENST00000454830 TCRBV7S3A2A0A539 114 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 GMNCA6NCL1 334 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 RASA4BC9J798 803 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 RASA4O43374 803 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 KIAA0754O94854 1291 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 GOT1P17174 413 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 PCSK1P29120 753 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 GBE1Q04446 702 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 NOMO1Q15155 1222 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 FAM35AQ86V20 835 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 CPT1BQ92523 772 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 TLCD1Q96CP7 247 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 PGBD4Q96DM1 585 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 NCAPGQ9BPX3 1015 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 SHOC2Q9UQ13 582 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 NAALADL1Q9UQQ1 740 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 ZSWIM8A7E2V4 1837 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 ODC1P11926 461 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 MATKP42679 507 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 ACLYP53396 1101 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 MRPS5P82675 430 aaKnown RBP14.2□□□□□ -0.14
CLK3-203ENST00000454830 LPIN1Q14693 890 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 STAT4Q14765 748 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 PRCCQ92733 491 aaPredicted RBP14.2□□□□□ -0.14
CLK3-203ENST00000454830 SERPINB12Q96P63 405 aa14.2□□□□□ -0.14
CLK3-203ENST00000454830 PRMT1Q99873 361 aaKnown RBP14.2□□□□□ -0.14
CLK3-203ENST00000454830 NRDE2Q9H7Z3 1164 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms