RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 POMCP01189 267 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 MMP3P08254 477 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 GRIA1P42261 906 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 BOLA3Q53S33 107 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 WSCD1Q658N2 575 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 CXCL17Q6UXB2 119 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 TRABD2AQ86V40 505 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 FUKQ8N0W3 1084 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 PPTC7Q8NI37 304 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 SGSM3Q96HU1 749 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 RNF157Q96PX1 679 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 MECRQ9BV79 373 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 SHCBP1LQ9BZQ2 653 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 VPS11Q9H270 941 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 CYP3A43Q9HB55 503 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 VTA1Q9NP79 307 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 SHOC2Q9UQ13 582 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-213ENST00000454468 PAPSS1O43252 624 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-213ENST00000454468 SNAI1O95863 264 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-213ENST00000454468 ITGAVP06756 1048 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 NCAM1P13591 858 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 BGNP21810 368 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 SLC6A3Q01959 620 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 SLC25A11Q02978 314 aaKnown RBP12.43□□□□□ -0.42
SMPD4-213ENST00000454468 NAA25Q14CX7 972 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 CCDC14Q49A88 953 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 LGSNQ5TDP6 509 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 LRRC38Q5VT99 294 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 TAPT1Q6NXT6 567 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 ZCCHC23Q6ZST2 131 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 IGDCC3Q8IVU1 814 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 SCN4BQ8IWT1 228 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 ADGRF2Q8IZF7 708 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 PDCD7Q8N8D1 485 aaKnown RBP12.43□□□□□ -0.42
SMPD4-213ENST00000454468 NPLOC4Q8TAT6 608 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 USP6NLQ92738 828 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 MCUR1Q96AQ8 359 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 GAD1Q99259 594 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 SLC17A6Q9P2U8 582 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 PCDHGC3Q9UN70 934 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 IQCA1LA6NCM1 817 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 MAML3Q96JK9 1138 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 UNKQ9C0B0 810 aaKnown RBP12.43□□□□□ -0.42
SMPD4-213ENST00000454468 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMPD4-213ENST00000454468 UGT1A9O60656 530 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 KRT37O76014 449 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 CYP3A5P20815 502 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 ATICP31939 592 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 TAF6P49848 677 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 TCEAL1Q15170 157 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 OASLQ15646 514 aaKnown RBP12.43□□□□□ -0.42
SMPD4-213ENST00000454468 PIGZQ86VD9 579 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 UNC5BQ8IZJ1 945 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 NDUFAF2Q8N183 169 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 CCT6BQ92526 530 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 MAGEB18Q96M61 343 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 TBCBQ99426 244 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 PARK7Q99497 189 aaKnown RBP12.43□□□□□ -0.42
SMPD4-213ENST00000454468 UGT1A7Q9HAW7 530 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 UGT1A10Q9HAW8 530 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 UGT1A8Q9HAW9 530 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 PTPRHQ9HD43 1115 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 ZFP69BQ9UJL9 534 aa12.43□□□□□ -0.42
SMPD4-213ENST00000454468 XPOTO43592 962 aaKnown RBP12.42□□□□□ -0.42
SMPD4-213ENST00000454468 FAM189A1O60320 539 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 DEUP1Q05D60 604 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 MFSD10Q14728 455 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 EML3Q32P44 896 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 SPDYCQ5MJ68 293 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 USP50Q70EL3 339 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-213ENST00000454468 MTDHQ86UE4 582 aaKnown RBP12.42□□□□□ -0.42
SMPD4-213ENST00000454468 FITM2Q8N6M3 262 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 PLD5Q8N7P1 536 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 CELF6Q96J87 481 aaKnown RBP12.42□□□□□ -0.42
SMPD4-213ENST00000454468 C16orf70Q9BSU1 422 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 PPARGC1AQ9UBK2 798 aaKnown RBP12.42□□□□□ -0.42
SMPD4-213ENST00000454468 UBQLN1Q9UMX0 589 aaKnown RBP12.42□□□□□ -0.42
SMPD4-213ENST00000454468 SMIM28A0A1B0GU29 152 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 TCRBV9S1A1TA0A576 114 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 ALOX15BO15296 676 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 TP73O15350 636 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 B3GAT3O94766 335 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 FSBPO95073 299 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 TAC1P20366 129 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 STIP1P31948 543 aaKnown RBP12.42□□□□□ -0.42
SMPD4-213ENST00000454468 MLH1P40692 756 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 GPX6P59796 221 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 PITX1P78337 314 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-213ENST00000454468 ITKQ08881 620 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 OLIG2Q13516 323 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 MFSD5Q6N075 450 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 CCDC185Q8N715 623 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 SLC35B2Q8TB61 432 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 LHX5Q9H2C1 402 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 PCDH18Q9HCL0 1135 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 ACSS2Q9NR19 701 aa12.42□□□□□ -0.42
SMPD4-213ENST00000454468 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMPD4-213ENST00000454468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.42□□□□□ -0.423e-8■□□□□ 9.5
SMPD4-213ENST00000454468 PAK5Q9P286 719 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms