RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 BICDL2A1A5D9 508 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 DYTNA2CJ06 578 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 J3KTA2 159 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 AKAP8O43823 692 aaKnown RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 NCR1O76036 304 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 PRKCBP05771 671 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ZFP36P26651 326 aaKnown RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 KLRK1P26718 216 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ADORA2AP29274 412 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 NTSR1P30989 418 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ZEB1P37275 1124 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ATXN1P54253 815 aaKnown RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 TIRAPP58753 221 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 SP2Q02086 613 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 R3HDM1Q15032 1099 aaKnown RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ACOX1Q15067 660 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 CDSNQ15517 529 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ADCK5Q3MIX3 580 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 SPDYE7PQ495Y7 208 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 PREPLQ4J6C6 727 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 TTC22Q5TAA0 569 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ATPAF1Q5TC12 328 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 MZT2BQ6NZ67 158 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 NFRKBQ6P4R8 1299 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 CFAP161Q6P656 301 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 RINLQ6ZS11 566 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 RAB11FIP2Q7L804 512 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ANKRD23Q86SG2 305 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 LRRTM4Q86VH4 590 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 TMTC1Q8IUR5 882 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 CPOQ8IVL8 374 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 IZUMO1Q8IYV9 350 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 TTC9BQ8N6N2 239 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 NGDNQ8NEJ9 315 aaKnown RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 OR6Y1Q8NGX8 325 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 SLC30A5Q8TAD4 765 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 RILPL2Q969X0 211 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 RSPRY1Q96DX4 576 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ZBTB45Q96K62 511 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ADOQ96SZ5 270 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ADAM2Q99965 735 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 EIF2AK1Q9BQI3 630 aaKnown RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 PYM1Q9BRP8 204 aaKnown RBP4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 C17orf80Q9BSJ5 609 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 VN1R3Q9BXE9 311 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 ALOXE3Q9BYJ1 711 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 EPS8L2Q9H6S3 715 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 TRIM36Q9NQ86 728 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 G6PC2Q9NQR9 355 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 RASSF1Q9NS23 344 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 GGA3Q9NZ52 723 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 SERTAD3Q9UJW9 196 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 RIMKLBQ9ULI2 386 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 SLC27A6Q9Y2P4 619 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 MAP3K2Q9Y2U5 619 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 NOX1Q9Y5S8 564 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 PRDM2Q13029 1718 aa4.31□□□□□ -1.72
HMGB1P15-201ENST00000453854 PNMA6EA0A0J9YXQ4 647 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 HMX3A6NHT5 357 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 TMEM200CA6NKL6 621 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 C1QTNF3-AMACRE9PGA6 284 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 H0Y3Z8 333 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 PLSCR1O15162 318 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 ZSCAN9O15535 394 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 ORC4O43929 436 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 SNX2O60749 519 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 CDKL5O76039 1030 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 TK1P04183 234 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 NR4A1P22736 598 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 SELENOPP49908 381 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 HNRNPMP52272 730 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 PRKAA2P54646 552 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 ACTR2P61160 394 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 ZXDAP98168 799 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 TLE2Q04725 743 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 MTAPQ13126 283 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 RESTQ13127 1097 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 CUL4BQ13620 913 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 TAF12Q16514 161 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM43BQ6ZT52 329 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 ANKS1BQ7Z6G8 1248 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 CPEB3Q8NE35 698 aaKnown RBP4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 OSCP1Q8WVF1 389 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 WDR60Q8WVS4 1066 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 RUBCNQ92622 972 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 RNF31Q96EP0 1072 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 MYEOVQ96EZ4 313 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 PAAF1Q9BRP4 392 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 TTPALQ9BTX7 342 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 VPS16Q9H269 839 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 RIC8AQ9NPQ8 531 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 WASH6PQ9NQA3 447 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 RXFP3Q9NSD7 469 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 CEP72Q9P209 647 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 SLC13A4Q9UKG4 626 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 USP22Q9UPT9 525 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 CRYL1Q9Y2S2 319 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 TMEM98Q9Y2Y6 226 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 TESMINQ9Y4I5 508 aa4.3□□□□□ -1.72
HMGB1P15-201ENST00000453854 RPGRIP1LQ68CZ1 1315 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms