RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 NOD1Q9Y239 953 aa12.27□□□□□ -0.45
VTA1-203ENST00000452973 ARL5CA6NH57 179 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 SPAG7O75391 227 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 CYP2F1P24903 491 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 ARL4CP56559 192 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 GJA9P57773 515 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 CACNB2Q08289 660 aaPredicted RBP12.26□□□□□ -0.45
VTA1-203ENST00000452973 EFTUD2Q15029 972 aaKnown RBP eCLIP12.26□□□□□ -0.45
VTA1-203ENST00000452973 NOMO1Q15155 1222 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 KCNA10Q16322 511 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 XKR4Q5GH76 650 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 KIAA0319Q5VV43 1072 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 C3orf58Q8NDZ4 430 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 GSTCDQ8NEC7 633 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 ATXN2LQ8WWM7 1075 aaKnown RBP12.26□□□□□ -0.45
VTA1-203ENST00000452973 FAF2Q96CS3 445 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 KCNK16Q96T55 309 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 KIF9Q9HAQ2 790 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 DDX20Q9UHI6 824 aaKnown RBP12.26□□□□□ -0.45
VTA1-203ENST00000452973 CHMP2BQ9UQN3 213 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 CA12O43570 354 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 ENDOD1O94919 500 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 ZBED1O96006 694 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 ATP5DP30049 168 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 SULT1E1P49888 294 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 GBE1Q04446 702 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 IRF5Q13568 498 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 PDK2Q15119 407 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 C3orf62Q6ZUJ4 267 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 SLC26A9Q7LBE3 791 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 PCGF5Q86SE9 256 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 PALM2Q8IXS6 379 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 FBXO36Q8NEA4 188 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 STK32AQ8WU08 396 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 KRT82Q9NSB4 513 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.26□□□□□ -0.45
VTA1-203ENST00000452973 MFHAS1Q9Y4C4 1052 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 FARP1Q9Y4F1 1045 aaPredicted RBP12.26□□□□□ -0.45
VTA1-203ENST00000452973 KIAA0754O94854 1291 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 CAP1Q01518 475 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 MPP2Q14168 576 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 ZDHHC17Q8IUH5 632 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 LRRC34Q8IZ02 419 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 PDIK1LQ8N165 341 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 SIX6OS1Q8N1H7 587 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 NAT8LQ8N9F0 302 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 CCDC110Q8TBZ0 833 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 RHOBTB2Q9BYZ6 727 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 FOXP3Q9BZS1 431 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 PADI3Q9ULW8 664 aa12.26□□□□□ -0.45
VTA1-203ENST00000452973 MYBPHLA2RUH7 354 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 DPYSL4O14531 572 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 ALOX15BO15296 676 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 GOT1P17174 413 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 AMPD1P23109 780 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 HOXC8P31273 242 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 L1CAMP32004 1257 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 LIG3P49916 1009 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 TNFAIP8L3Q5GJ75 292 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 VSTM1Q6UX27 236 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 CEP128Q6ZU80 1094 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 HFE2Q6ZVN8 426 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 C4orf33Q8N1A6 199 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 CABS1Q96KC9 395 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 DUSP16Q9BY84 665 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 DNAI2Q9GZS0 605 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 TRMT13Q9NUP7 481 aaKnown RBP12.25□□□□□ -0.45
VTA1-203ENST00000452973 ZNF236Q9UL36 1845 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 CREB3O43889 395 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 B3GAT3O94766 335 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 NPR3P17342 541 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 STIP1P31948 543 aaKnown RBP12.25□□□□□ -0.45
VTA1-203ENST00000452973 TKTL1P51854 596 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 GPX6P59796 221 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 SYPL2Q5VXT5 272 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 AGMOQ6ZNB7 445 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 PAQR9Q6ZVX9 377 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 TOP6BLQ8N6T0 577 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 TTC25Q96NG3 672 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 FRMD8P1Q9BZ68 369 aaPredicted RBP12.25□□□□□ -0.45
VTA1-203ENST00000452973 SENP6Q9GZR1 1112 aaPredicted RBP12.25□□□□□ -0.45
VTA1-203ENST00000452973 NRDE2Q9H7Z3 1164 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 CRTAC1Q9NQ79 661 aa12.25□□□□□ -0.45
VTA1-203ENST00000452973 M0QYT0 321 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 CAPN9O14815 690 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 SEPT4O43236 478 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 MGEA5O60502 916 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 APRTP07741 180 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
VTA1-203ENST00000452973 ACADSBP45954 432 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 YWHAZP63104 245 aaKnown RBP12.24□□□□□ -0.45
VTA1-203ENST00000452973 ZKSCAN8Q15776 578 aaPredicted RBP12.24□□□□□ -0.45
VTA1-203ENST00000452973 PKN2Q16513 984 aaKnown RBP12.24□□□□□ -0.45
VTA1-203ENST00000452973 EFHC1Q5JVL4 640 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 GKAP1Q5VSY0 366 aaPredicted RBP12.24□□□□□ -0.45
VTA1-203ENST00000452973 CLEC20AQ6ZU45 233 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 RELL1Q8IUW5 271 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 HACE1Q8IYU2 909 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 OTUD6BQ8N6M0 293 aa12.24□□□□□ -0.45
VTA1-203ENST00000452973 SEC16BQ96JE7 1060 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms