RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 LSM7Q9UK45 103 aaKnown RBP13.58□□□□□ -0.23
CHD3-206ENST00000452447 NCOR2Q9Y618 2525 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 A0A1W2PQH9 124 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 FOXD2O60548 495 aaPredicted RBP13.58□□□□□ -0.24
CHD3-206ENST00000452447 RALAP11233 206 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 GRIA2P42262 883 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 DGKEP52429 567 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 C10orf120Q5SQS8 335 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 NUDT18Q6ZVK8 323 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 HTR3DQ70Z44 454 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 CCDC186Q7Z3E2 898 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 C12orf40Q86WS4 652 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 CCDC33Q8N5R6 958 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 NAT16Q8N8M0 369 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 SLC4A11Q8NBS3 891 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 LOXL4Q96JB6 756 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 DUSP9Q99956 384 aaKnown RBP13.58□□□□□ -0.24
CHD3-206ENST00000452447 KLF16Q9BXK1 252 aaPredicted RBP13.58□□□□□ -0.24
CHD3-206ENST00000452447 NMUR1Q9HB89 426 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 METTL14Q9HCE5 456 aaKnown RBP13.58□□□□□ -0.24
CHD3-206ENST00000452447 SPHK2Q9NRA0 654 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.58□□□□□ -0.242e-8■□□□□ 10.2
CHD3-206ENST00000452447 OSER1Q9NX31 292 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 DEC1Q9P2X7 70 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 EBF1Q9UH73 591 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 DNMT3LQ9UJW3 386 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 COQ4Q9Y3A0 265 aa13.58□□□□□ -0.24
CHD3-206ENST00000452447 THADAQ6YHU6 1953 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 TBC1D3BA6NDS4 549 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 TIE1P35590 1138 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 TNFRSF4P43489 277 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 PLA2G4AP47712 749 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 RAD23BP54727 409 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 YWHAEP62258 255 aaKnown RBP13.57□□□□□ -0.24
CHD3-206ENST00000452447 KDSRQ06136 332 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 CUL2Q13617 745 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 CSRP2Q16527 193 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 HSF5Q4G112 596 aaPredicted RBP13.57□□□□□ -0.24
CHD3-206ENST00000452447 KLHL10Q6JEL2 608 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 KLHDC10Q6PID8 442 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 KBTBD6Q86V97 674 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 WBP2Q969T9 261 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 CDK5RAP1Q96SZ6 601 aaKnown RBP13.57□□□□□ -0.24
CHD3-206ENST00000452447 NUDT5Q9UKK9 219 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 MAN1B1Q9UKM7 699 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 MMP17Q9ULZ9 603 aa13.57□□□□□ -0.24
CHD3-206ENST00000452447 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.57□□□□□ -0.24
CHD3-206ENST00000452447 LAMA1P25391 3075 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 A0A0A0MRY4 1105 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 HOXC11O43248 304 aaPredicted RBP13.56□□□□□ -0.24
CHD3-206ENST00000452447 ALDH1A2O94788 518 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 GBP1P32455 592 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 LRMPQ12912 555 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 ELF2Q15723 593 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 CRY1Q16526 586 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 CCDC40Q4G0X9 1142 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 ARHGAP17Q68EM7 881 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 ANO7Q6IWH7 933 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 PRR23CQ6ZRP0 262 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 TTC30AQ86WT1 665 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 TMEM25Q86YD3 366 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 ALLCQ8N6M5 410 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 ANKRD52Q8NB46 1076 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 TXNDC5Q8NBS9 432 aaKnown RBP13.56□□□□□ -0.24
CHD3-206ENST00000452447 SLC35C1Q96A29 364 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 ZC3H10Q96K80 434 aaKnown RBP13.56□□□□□ -0.24
CHD3-206ENST00000452447 CEP63Q96MT8 703 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 UBXN6Q9BZV1 441 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 ARRDC1-AS1Q9H2J1 176 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 CLIC5Q9NZA1 410 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 USP3Q9Y6I4 520 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 NUP205Q92621 2012 aa13.56□□□□□ -0.24
CHD3-206ENST00000452447 TPRP12270 2363 aaKnown RBP13.55□□□□□ -0.24
CHD3-206ENST00000452447 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.55□□□□□ -0.24
CHD3-206ENST00000452447 BICDL2A1A5D9 508 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 TULP3O75386 442 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 RHOBTB1O94844 696 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 CD19P15391 556 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 TBXAS1P24557 533 aaPredicted RBP13.55□□□□□ -0.24
CHD3-206ENST00000452447 FMO5P49326 533 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 ATXN1P54253 815 aaKnown RBP13.55□□□□□ -0.24
CHD3-206ENST00000452447 MESP2Q0VG99 397 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 CETN1Q12798 172 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 USP39Q53GS9 565 aaKnown RBP13.55□□□□□ -0.24
CHD3-206ENST00000452447 SGO2Q562F6 1265 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 EOGTQ5NDL2 527 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 TPGS1Q6ZTW0 290 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 PIGZQ86VD9 579 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 MIB1Q86YT6 1006 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 SFTPA1Q8IWL2 248 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 ETFBKMTQ8IXQ9 262 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 ARHGAP18Q8N392 663 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 ZNF276Q8N554 614 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 IL17RCQ8NAC3 791 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 NETO1Q8TDF5 533 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 XPO6Q96QU8 1125 aaKnown RBP13.55□□□□□ -0.24
CHD3-206ENST00000452447 BBS2Q9BXC9 721 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 TPSD1Q9BZJ3 242 aa13.55□□□□□ -0.24
CHD3-206ENST00000452447 POLMQ9NP87 494 aaPredicted RBP13.55□□□□□ -0.24
CHD3-206ENST00000452447 WDR35Q9P2L0 1181 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms