RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 APOBEC3GQ9HC16 384 aaKnown RBP22.82■■□□□ 1.24
C9orf3-208ENST00000451893 BEST1O76090 585 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 ADCY5O95622 1261 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 KDSRQ06136 332 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 TADA2BQ86TJ2 420 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 ADGRG2Q8IZP9 1017 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 C12orf50Q8NA57 414 aaPredicted RBP22.81■■□□□ 1.24
C9orf3-208ENST00000451893 NELFBQ8WX92 580 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 TWNKQ96RR1 684 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 CSNK1G1Q9HCP0 422 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 ARHGEF4Q9NR80 690 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 SEMA4GQ9NTN9 838 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 RAB20Q9NX57 234 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 NFE2L3Q9Y4A8 694 aa22.81■■□□□ 1.24
C9orf3-208ENST00000451893 KIAA1549LQ6ZVL6 1849 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 FOXD2O60548 495 aaPredicted RBP22.8■■□□□ 1.24
C9orf3-208ENST00000451893 CILPO75339 1184 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 GBP1P32455 592 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 ATP5C1P36542 298 aaKnown RBP22.8■■□□□ 1.24
C9orf3-208ENST00000451893 OPRD1P41143 372 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 FKBP3Q00688 224 aaKnown RBP22.8■■□□□ 1.24
C9orf3-208ENST00000451893 ELF2Q15723 593 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 TPD52L1Q16890 204 aaPredicted RBP22.8■■□□□ 1.24
C9orf3-208ENST00000451893 ZCWPW2Q504Y3 356 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 SNX30Q5VWJ9 437 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 KLHL10Q6JEL2 608 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 CLEC20AQ6ZU45 233 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 ZMIZ2Q8NF64 920 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 TRIM5Q9C035 493 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 PARD6AQ9NPB6 346 aa22.8■■□□□ 1.24
C9orf3-208ENST00000451893 POLR3BQ9NW08 1133 aaPredicted RBP22.8■■□□□ 1.24
C9orf3-208ENST00000451893 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.8■■□□□ 1.24
C9orf3-208ENST00000451893 SLC16A3O15427 465 aaKnown RBP22.79■■□□□ 1.24
C9orf3-208ENST00000451893 CYP26A1O43174 497 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 CBFA2T2O43439 604 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 ALDH1A2O94788 518 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 HOXC13P31276 330 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 EIF2DP41214 584 aaKnown RBP22.79■■□□□ 1.24
C9orf3-208ENST00000451893 AASDHQ4L235 1098 aaPredicted RBP22.79■■□□□ 1.24
C9orf3-208ENST00000451893 LY6G5CQ5SRR4 150 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 CCDC33Q8N5R6 958 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 MRFAP1L1Q96HT8 127 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 FANCLQ9NW38 375 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 IL37Q9NZH6 218 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 NAGPAQ9UK23 515 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 CTNND2Q9UQB3 1225 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 SCML2Q9UQR0 700 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 ZNF292O60281 2723 aa22.79■■□□□ 1.24
C9orf3-208ENST00000451893 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.78■■□□□ 1.24
C9orf3-208ENST00000451893 KAT7O95251 611 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 FGFR1OPO95684 399 aaKnown RBP22.78■■□□□ 1.24
C9orf3-208ENST00000451893 RALAP11233 206 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 ZNF18P17022 549 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 CDC25BP30305 580 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 TIE1P35590 1138 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 YWHAEP62258 255 aaKnown RBP22.78■■□□□ 1.24
C9orf3-208ENST00000451893 MRPS21P82921 87 aaKnown RBP22.78■■□□□ 1.24
C9orf3-208ENST00000451893 CSRP2Q16527 193 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 C10orf120Q5SQS8 335 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 PPP1R26Q5T8A7 1209 aaPredicted RBP22.78■■□□□ 1.24
C9orf3-208ENST00000451893 RHBDF2Q6PJF5 856 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 PRR23CQ6ZRP0 262 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 NAT16Q8N8M0 369 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 USP33Q8TEY7 942 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 ARRDC1-AS1Q9H2J1 176 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 PNPLA8Q9NP80 782 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 CISHQ9NSE2 258 aa22.78■■□□□ 1.24
C9orf3-208ENST00000451893 BCCIPQ9P287 314 aaKnown RBP eCLIP22.78■■□□□ 1.24
C9orf3-208ENST00000451893 ARMCX3Q9UH62 379 aaPredicted RBP22.78■■□□□ 1.24
C9orf3-208ENST00000451893 SDK1Q7Z5N4 2213 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 FAM92AA1XBS5 289 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 TBC1D3BA6NDS4 549 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 RHOBTB1O94844 696 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 ZDHHC11BP0C7U3 371 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 RARGP13631 454 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 CDK11BP21127 795 aaKnown RBP22.77■■□□□ 1.24
C9orf3-208ENST00000451893 GRIA2P42262 883 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 SLC6A11P48066 632 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 ZNF75DP51815 510 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 LRRC63Q05C16 580 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 CCDC40Q4G0X9 1142 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 USP39Q53GS9 565 aaKnown RBP22.77■■□□□ 1.24
C9orf3-208ENST00000451893 ANO7Q6IWH7 933 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 GPRIN1Q7Z2K8 1008 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 KBTBD6Q86V97 674 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 BBS7Q8IWZ6 715 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 NETO1Q8TDF5 533 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 EZH1Q92800 747 aaPredicted RBP22.77■■□□□ 1.24
C9orf3-208ENST00000451893 TMEM176AQ96HP8 235 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 FAXDC2Q96IV6 333 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 LOXL4Q96JB6 756 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 MED15Q96RN5 788 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 RTKNQ9BST9 563 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 DUSP16Q9BY84 665 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 HSD3B7Q9H2F3 369 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 SPHK2Q9NRA0 654 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 DLL3Q9NYJ7 618 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 DEC1Q9P2X7 70 aa22.77■■□□□ 1.24
C9orf3-208ENST00000451893 EML5Q05BV3 1969 aa22.76■■□□□ 1.23
C9orf3-208ENST00000451893 A0A1W2PQH9 124 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms