RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 A0A1W2PQH9 124 aa23.12■■□□□ 1.29
CPSF7-208ENST00000450000 ZBTB24O43167 697 aaPredicted RBP23.12■■□□□ 1.29
CPSF7-208ENST00000450000 TGM1P22735 817 aa23.12■■□□□ 1.29
CPSF7-208ENST00000450000 TNFRSF4P43489 277 aa23.12■■□□□ 1.29
CPSF7-208ENST00000450000 PLA2G4AP47712 749 aa23.12■■□□□ 1.29
CPSF7-208ENST00000450000 ATXN1P54253 815 aaKnown RBP23.12■■□□□ 1.29
CPSF7-208ENST00000450000 CCDC40Q4G0X9 1142 aa23.12■■□□□ 1.29
CPSF7-208ENST00000450000 HSF5Q4G112 596 aaPredicted RBP23.12■■□□□ 1.29
CPSF7-208ENST00000450000 ISM2Q6H9L7 571 aa23.12■■□□□ 1.29
CPSF7-208ENST00000450000 ANO7Q6IWH7 933 aa23.12■■□□□ 1.29
CPSF7-208ENST00000450000 ARHGAP18Q8N392 663 aa23.12■■□□□ 1.29
CPSF7-208ENST00000450000 BCCIPQ9P287 314 aaKnown RBP eCLIP23.12■■□□□ 1.29
CPSF7-208ENST00000450000 KLF8O95600 359 aaPredicted RBP23.11■■□□□ 1.29
CPSF7-208ENST00000450000 KIF11P52732 1056 aa23.11■■□□□ 1.29
CPSF7-208ENST00000450000 CETN1Q12798 172 aa23.11■■□□□ 1.29
CPSF7-208ENST00000450000 GAB4Q2WGN9 574 aa23.11■■□□□ 1.29
CPSF7-208ENST00000450000 HTR3DQ70Z44 454 aa23.11■■□□□ 1.29
CPSF7-208ENST00000450000 TRMT11Q7Z4G4 463 aaKnown RBP23.11■■□□□ 1.29
CPSF7-208ENST00000450000 PGBD3Q8N328 593 aa23.11■■□□□ 1.29
CPSF7-208ENST00000450000 ALLCQ8N6M5 410 aa23.11■■□□□ 1.29
CPSF7-208ENST00000450000 TXNDC5Q8NBS9 432 aaKnown RBP23.11■■□□□ 1.29
CPSF7-208ENST00000450000 TATDN2Q93075 761 aa23.11■■□□□ 1.29
CPSF7-208ENST00000450000 DHTKD1Q96HY7 919 aaPredicted RBP23.11■■□□□ 1.29
CPSF7-208ENST00000450000 KLF16Q9BXK1 252 aaPredicted RBP23.11■■□□□ 1.29
CPSF7-208ENST00000450000 WDR35Q9P2L0 1181 aa23.11■■□□□ 1.29
CPSF7-208ENST00000450000 HESX1Q9UBX0 185 aa23.11■■□□□ 1.29
CPSF7-208ENST00000450000 TRIM49BA6NDI0 452 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 HHLA1C9JL84 531 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 HOXC11O43248 304 aaPredicted RBP23.1■■□□□ 1.29
CPSF7-208ENST00000450000 EPN2O95208 641 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 CD19P15391 556 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 CRY1Q16526 586 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 CBWD6Q4V339 395 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 CBWD3Q5JTY5 395 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 CBWD5Q5RIA9 395 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 KLHL10Q6JEL2 608 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 KLHDC10Q6PID8 442 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 TPGS1Q6ZTW0 290 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 RSRC2Q7L4I2 434 aaKnown RBP23.1■■□□□ 1.29
CPSF7-208ENST00000450000 CCDC186Q7Z3E2 898 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 C12orf40Q86WS4 652 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 TMEM25Q86YD3 366 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 DUSP9Q99956 384 aaKnown RBP23.1■■□□□ 1.29
CPSF7-208ENST00000450000 BBS2Q9BXC9 721 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 TPSD1Q9BZJ3 242 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.1■■□□□ 1.29
CPSF7-208ENST00000450000 NUDT5Q9UKK9 219 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 PCDHGA5Q9Y5G8 931 aa23.1■■□□□ 1.29
CPSF7-208ENST00000450000 NEDD8-MDP1E9PL57 170 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 TULP3O75386 442 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 TBXAS1P24557 533 aaPredicted RBP23.09■■□□□ 1.29
CPSF7-208ENST00000450000 PGFP49763 221 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 RAD23BP54727 409 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 LRMPQ12912 555 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 CUL2Q13617 745 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 PLK5Q496M5 336 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 C10orf76Q5T2E6 689 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 IL31Q6EBC2 164 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 GRAMD4Q6IC98 578 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 SDE2Q6IQ49 451 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 MIB1Q86YT6 1006 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 SLC4A11Q8NBS3 891 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 SPATA20Q8TB22 786 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 ZC3H10Q96K80 434 aaKnown RBP23.09■■□□□ 1.29
CPSF7-208ENST00000450000 ARID3AQ99856 593 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 NMUR1Q9HB89 426 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 DNAJC17Q9NVM6 304 aaKnown RBP23.09■■□□□ 1.29
CPSF7-208ENST00000450000 RASAL2Q9UJF2 1139 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 STRIP2Q9ULQ0 834 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 INVSQ9Y283 1065 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 ZNF510Q9Y2H8 683 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 SPTBN4Q9H254 2564 aa23.09■■□□□ 1.29
CPSF7-208ENST00000450000 HELZP42694 1942 aaKnown RBP23.08■■□□□ 1.29
CPSF7-208ENST00000450000 BICDL2A1A5D9 508 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 DCLK1O15075 740 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 MDM4O15151 490 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 MAP3K13O43283 966 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 PMS1P54277 932 aaKnown RBP23.08■■□□□ 1.29
CPSF7-208ENST00000450000 MCCD1P59942 119 aaPredicted RBP23.08■■□□□ 1.29
CPSF7-208ENST00000450000 COG7P83436 770 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 CREB5Q02930 508 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 CCDC6Q16204 474 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 SGO2Q562F6 1265 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 ARHGAP17Q68EM7 881 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 ELOA2Q8IYF1 753 aaPredicted RBP23.08■■□□□ 1.29
CPSF7-208ENST00000450000 ANKRD52Q8NB46 1076 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 SPACA7Q96KW9 195 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 CNOT6LQ96LI5 555 aaKnown RBP23.08■■□□□ 1.29
CPSF7-208ENST00000450000 CEP63Q96MT8 703 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 UBXN6Q9BZV1 441 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 LRRC4Q9HBW1 653 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 OSER1Q9NX31 292 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 CLIC5Q9NZA1 410 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 MAN1B1Q9UKM7 699 aa23.08■■□□□ 1.29
CPSF7-208ENST00000450000 A0A0A0MRY4 1105 aa23.07■■□□□ 1.28
CPSF7-208ENST00000450000 DCDC2BA2VCK2 349 aa23.07■■□□□ 1.28
CPSF7-208ENST00000450000 ZNF806P0C7X5 589 aa23.07■■□□□ 1.28
CPSF7-208ENST00000450000 EFEMP1Q12805 493 aa23.07■■□□□ 1.28
CPSF7-208ENST00000450000 BYSLQ13895 437 aaKnown RBP23.07■■□□□ 1.28
CPSF7-208ENST00000450000 GOLGA7BQ2TAP0 167 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms