RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 APPL2Q8NEU8 664 aa14.35□□□□□ -0.11
ITGB4-202ENST00000449880 FANCEQ9HB96 536 aa14.35□□□□□ -0.11
ITGB4-202ENST00000449880 AFF4Q9UHB7 1163 aaKnown RBP14.35□□□□□ -0.11
ITGB4-202ENST00000449880 SNTNA6NMZ2 147 aa14.35□□□□□ -0.11
ITGB4-202ENST00000449880 EVPLLA8MZ36 301 aa14.35□□□□□ -0.11
ITGB4-202ENST00000449880 DFFAO00273 331 aa14.35□□□□□ -0.11
ITGB4-202ENST00000449880 CDK7P50613 346 aa14.35□□□□□ -0.11
ITGB4-202ENST00000449880 IFI35P80217 286 aaPredicted RBP14.35□□□□□ -0.11
ITGB4-202ENST00000449880 EPS8Q12929 822 aa14.35□□□□□ -0.11
ITGB4-202ENST00000449880 NT5DC3Q86UY8 548 aa14.35□□□□□ -0.11
ITGB4-202ENST00000449880 ZNF513Q8N8E2 541 aaPredicted RBP14.35□□□□□ -0.11
ITGB4-202ENST00000449880 TDRD5Q8NAT2 981 aaKnown RBP14.35□□□□□ -0.11
ITGB4-202ENST00000449880 RIOX1Q9H6W3 641 aa14.35□□□□□ -0.11
ITGB4-202ENST00000449880 SDR42E2A6NKP2 422 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 TADA2AO75478 443 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 LSM8O95777 96 aaKnown RBP14.34□□□□□ -0.11
ITGB4-202ENST00000449880 WDR72Q3MJ13 1102 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 PPP4R4Q6NUP7 873 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 LRRC8DQ7L1W4 858 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 SETD9Q8NE22 299 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 ZFYVE19Q96K21 471 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 PRMT6Q96LA8 375 aaPredicted RBP14.34□□□□□ -0.11
ITGB4-202ENST00000449880 FOPNLQ96NB1 174 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 ECSITQ9BQ95 431 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 NIF3L1Q9GZT8 377 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 ELP3Q9H9T3 547 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 ZBTB39O15060 712 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 CYP2C8P10632 490 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 LCP1P13796 627 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 ME2P23368 584 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 SNAPC2Q13487 334 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 PKN2Q16513 984 aaKnown RBP14.34□□□□□ -0.11
ITGB4-202ENST00000449880 ZCCHC9Q8N567 271 aaKnown RBP14.34□□□□□ -0.11
ITGB4-202ENST00000449880 AGBL1Q96MI9 1066 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 OLFM1Q99784 485 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 VPS9D1Q9Y2B5 631 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 GH1P01241 217 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 MYL4P12829 197 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 SPOCD1Q6ZMY3 1216 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 TFB1MQ8WVM0 346 aaKnown RBP14.34□□□□□ -0.11
ITGB4-202ENST00000449880 BDH2Q9BUT1 245 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 CIDEBQ9UHD4 219 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 AREL1O15033 823 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 NPTXRO95502 500 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 CPA3P15088 417 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 CYP11B2P19099 503 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 PRKAA1Q13131 559 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 TMEM63BQ5T3F8 832 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 UNC45BQ8IWX7 931 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 RDM1Q8NG50 284 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 FNIP1Q8TF40 1166 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 OMA1Q96E52 524 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 UBE2OQ9C0C9 1292 aaKnown RBP14.34□□□□□ -0.11
ITGB4-202ENST00000449880 PCDHA3Q9Y5H8 950 aa14.34□□□□□ -0.11
ITGB4-202ENST00000449880 MSH4O15457 936 aa14.33□□□□□ -0.11
ITGB4-202ENST00000449880 PDE9AO76083 593 aa14.33□□□□□ -0.11
ITGB4-202ENST00000449880 AMPD2Q01433 879 aa14.33□□□□□ -0.11
ITGB4-202ENST00000449880 PLEKHM3Q6ZWE6 761 aa14.33□□□□□ -0.11
ITGB4-202ENST00000449880 DHDDSQ86SQ9 333 aa14.33□□□□□ -0.11
ITGB4-202ENST00000449880 GMCL1P1Q8NEA9 526 aa14.33□□□□□ -0.11
ITGB4-202ENST00000449880 S100ZQ8WXG8 99 aa14.33□□□□□ -0.11
ITGB4-202ENST00000449880 TCF7L2Q9NQB0 619 aa14.33□□□□□ -0.11
ITGB4-202ENST00000449880 C6orf203Q9P0P8 240 aaPredicted RBP14.33□□□□□ -0.11
ITGB4-202ENST00000449880 AGAP1Q9UPQ3 857 aa14.33□□□□□ -0.11
ITGB4-202ENST00000449880 EEF2KO00418 725 aaKnown RBP14.33□□□□□ -0.12
ITGB4-202ENST00000449880 HIST1H2AGP0C0S8 130 aaPredicted RBP14.33□□□□□ -0.12
ITGB4-202ENST00000449880 HIST1H2ADP20671 130 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 RPS12P25398 132 aaKnown RBP14.33□□□□□ -0.12
ITGB4-202ENST00000449880 PDK3Q15120 406 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 TBCELQ5QJ74 424 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 OLFML1Q6UWY5 402 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 ZNF669Q96BR6 464 aaPredicted RBP14.33□□□□□ -0.12
ITGB4-202ENST00000449880 HIST1H2AHQ96KK5 128 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 HIST1H2AJQ99878 128 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 H2AFJQ9BTM1 129 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 C1orf232A0A0U1RR37 186 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 RNF103O00237 685 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 ZSCAN9O15535 394 aaPredicted RBP14.33□□□□□ -0.12
ITGB4-202ENST00000449880 GRIN3BO60391 1043 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 FKBP9O95302 570 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 SLC1A6P48664 564 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 MMRN1Q13201 1228 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 KYAT3Q6YP21 454 aaKnown RBP14.33□□□□□ -0.12
ITGB4-202ENST00000449880 FKBP9P1Q75LS8 142 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 ZFYVE28Q9HCC9 887 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 ANKEF1Q9NU02 776 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 IGSF9BQ9UPX0 1349 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 F5H423 210 aaPredicted RBP14.33□□□□□ -0.12
ITGB4-202ENST00000449880 CD4P01730 458 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 IL12RB1P42701 662 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 PTGER2P43116 358 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 TJAP1Q5JTD0 557 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 GJB7Q6PEY0 223 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 ATPAF2Q8N5M1 289 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 TCP10LQ8TDR4 215 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 SLC38A7Q9NVC3 462 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 RRN3Q9NYV6 651 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 PCYOX1Q9UHG3 505 aa14.33□□□□□ -0.12
ITGB4-202ENST00000449880 CBX6O95503 412 aa14.32□□□□□ -0.12
ITGB4-202ENST00000449880 EARS2Q5JPH6 523 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms