RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 TFDP2Q14188 446 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 NAA30Q147X3 362 aaPredicted RBP10.1□□□□□ -0.79
RFC4-210ENST00000449502 MAP9Q49MG5 647 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 ATP13A4Q4VNC1 1196 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 EFHC2Q5JST6 749 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 ERMARDQ5T6L9 678 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 SH3PXD2AQ5TCZ1 1133 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 SDHAF4Q5VUM1 108 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 TRNP1Q6NT89 227 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 MFSD7Q6UXD7 560 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 BEND5Q7L4P6 421 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 TMC7Q7Z402 723 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 TADA2BQ86TJ2 420 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 MON1AQ86VX9 555 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 IFT20Q8IY31 132 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 CCDC105Q8IYK2 499 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 GPR65Q8IYL9 337 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 TTC13Q8NBP0 860 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 SCAMP5Q8TAC9 235 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 GIPC2Q8TF65 315 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 GRK7Q8WTQ7 553 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 RAPGEF5Q92565 580 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 TSC1Q92574 1164 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 EDEM1Q92611 657 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 RUBCNQ92622 972 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 KHSRPQ92945 711 aaKnown RBP eCLIP10.1□□□□□ -0.793e-6■■□□□ 13.8
RFC4-210ENST00000449502 ACSF2Q96CM8 615 aaPredicted RBP10.1□□□□□ -0.79
RFC4-210ENST00000449502 SPATA17Q96L03 361 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 CEP295NLQ96MC4 621 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 EMILIN2Q9BXX0 1053 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 CYP4F11Q9HBI6 524 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 TLR8Q9NR97 1041 aaKnown RBP10.1□□□□□ -0.79
RFC4-210ENST00000449502 DDIT4Q9NX09 232 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 CXXC1Q9P0U4 656 aaPredicted RBP10.1□□□□□ -0.79
RFC4-210ENST00000449502 MAFFQ9ULX9 164 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 SCML2Q9UQR0 700 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 USP3Q9Y6I4 520 aa10.1□□□□□ -0.79
RFC4-210ENST00000449502 H3BRJ5 948 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 MDM4O15151 490 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 CXCL14O95715 111 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 CTSAP10619 480 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 TCF4P15884 667 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 ZFXP17010 805 aaPredicted RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 KDELR1P24390 212 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 IL1R2P27930 398 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 PTPN7P35236 360 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 BMPR1AP36894 532 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 ARL4AP40617 200 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 PSEN1P49768 467 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 HDAC4P56524 1084 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 DR1Q01658 176 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 LMNB2Q03252 620 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 PLD1Q13393 1074 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 RAB33AQ14088 237 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 DHX34Q14147 1143 aaKnown RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 BRD3Q15059 726 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 TXNRD3NBQ6F5E7 133 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 RSPO2Q6UXX9 243 aaPredicted RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 HFE2Q6ZVN8 426 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 FAM131BQ86XD5 332 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 PSTKQ8IV42 348 aaKnown RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 RNF168Q8IYW5 571 aaPredicted RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 ARFGAP1Q8N6T3 406 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 KLHL23Q8NBE8 558 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 CMASQ8NFW8 434 aaPredicted RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 ZNF461Q8TAF7 563 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 MICAL1Q8TDZ2 1067 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 CENPIQ92674 756 aaPredicted RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 CCDC114Q96M63 670 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 CDK5RAP1Q96SZ6 601 aaKnown RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 NPY6RQ99463 290 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 CLSTN3Q9BQT9 956 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 LRRC1Q9BTT6 524 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 PARD6BQ9BYG5 372 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 FRMD8P1Q9BZ68 369 aaPredicted RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 NACA2Q9H009 215 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 DDX47Q9H0S4 455 aaKnown RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 RAB17Q9H0T7 212 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 DHX35Q9H5Z1 703 aaKnown RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 WDCPQ9H6R7 721 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 ENTPD7Q9NQZ7 604 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 TMEM30AQ9NV96 361 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.09□□□□□ -0.79
RFC4-210ENST00000449502 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.09□□□□□ -0.79
RFC4-210ENST00000449502 FNIP2Q9P278 1114 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 PCDH10Q9P2E7 1040 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 HSFX1Q9UBD0 423 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 MAGED2Q9UNF1 606 aaPredicted RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 AP4E1Q9UPM8 1137 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 EFR3BQ9Y2G0 817 aa10.09□□□□□ -0.79
RFC4-210ENST00000449502 UTP11Q9Y3A2 253 aaKnown RBP10.09□□□□□ -0.79
RFC4-210ENST00000449502 HTTP42858 3142 aa10.08□□□□□ -0.8
RFC4-210ENST00000449502 hCG_1818297A0A087WSY0 165 aa10.08□□□□□ -0.8
RFC4-210ENST00000449502 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.08□□□□□ -0.8
RFC4-210ENST00000449502 A0A1W2PQH9 124 aa10.08□□□□□ -0.8
RFC4-210ENST00000449502 WDR27A2RRH5 827 aa10.08□□□□□ -0.8
RFC4-210ENST00000449502 FAM187AA6NFU0 413 aa10.08□□□□□ -0.8
RFC4-210ENST00000449502 SLC38A8A6NNN8 435 aa10.08□□□□□ -0.8
RFC4-210ENST00000449502 TNFRSF10BO14763 440 aa10.08□□□□□ -0.8
RFC4-210ENST00000449502 APOL1O14791 398 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms