RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 TMEM191CA6NGB0 347 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 CAPN9O14815 690 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 CCP110O43303 1012 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 MTA2O94776 668 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 RALAP11233 206 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 MYL4P12829 197 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 NCAM1P13591 858 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 RFC1P35251 1148 aaPredicted RBP15.32■□□□□ 0.04
SHANK2-210ENST00000449116 FLT3P36888 993 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 ARHGAP25P42331 645 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 PGFP49763 221 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 RPL7AP62424 266 aaKnown RBP15.32■□□□□ 0.04
SHANK2-210ENST00000449116 ARHGAP29Q52LW3 1261 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 EP400NLQ6ZTU2 488 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 GAREM2Q75VX8 874 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 GRASPQ7Z6J2 395 aaPredicted RBP15.32■□□□□ 0.04
SHANK2-210ENST00000449116 GPR149Q86SP6 731 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 TMEM150AQ86TG1 271 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 DEFB106AQ8N104 65 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 EMC1Q8N766 993 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 JOSD2Q8TAC2 188 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 FNIP1Q8TF40 1166 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 CALR3Q96L12 384 aaKnown RBP15.32■□□□□ 0.04
SHANK2-210ENST00000449116 OSGEPQ9NPF4 335 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 OSER1Q9NX31 292 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 MTMR10Q9NXD2 777 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.32■□□□□ 0.04
SHANK2-210ENST00000449116 COG5Q9UP83 839 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 ZKSCAN5Q9Y2L8 839 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 DUSP10Q9Y6W6 482 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 SZT2Q5T011 3432 aa15.32■□□□□ 0.04
SHANK2-210ENST00000449116 ZNF638Q14966 1978 aaKnown RBP15.31■□□□□ 0.04
SHANK2-210ENST00000449116 C2CD4BA6NLJ0 364 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 ABL1P00519 1130 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 FYNP06241 537 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 RARGP13631 454 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 PDGFRAP16234 1089 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 GPD1P21695 349 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 NOS2P35228 1153 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 LTBRP36941 435 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 MATKP42679 507 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 NOP2P46087 812 aaKnown RBP15.31■□□□□ 0.04
SHANK2-210ENST00000449116 TUBP50607 506 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 HADHBP55084 474 aaKnown RBP15.31■□□□□ 0.04
SHANK2-210ENST00000449116 ITIH3Q06033 890 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 DLX2Q07687 328 aaPredicted RBP15.31■□□□□ 0.04
SHANK2-210ENST00000449116 DCAF6Q58WW2 860 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 TADA2BQ86TJ2 420 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 REXO1L1PQ8IX06 675 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 CCAR2Q8N163 923 aaKnown RBP15.31■□□□□ 0.04
SHANK2-210ENST00000449116 KIAA1524Q8TCG1 905 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 RXFP2Q8WXD0 754 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 EDEM1Q92611 657 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 MRPS31Q92665 395 aaKnown RBP15.31■□□□□ 0.04
SHANK2-210ENST00000449116 CDK5RAP1Q96SZ6 601 aaKnown RBP15.31■□□□□ 0.04
SHANK2-210ENST00000449116 APOL5Q9BWW9 433 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 ADAM7Q9H2U9 754 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 ATXN3LQ9H3M9 355 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 LZTFL1Q9NQ48 299 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 KCND1Q9NSA2 647 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.31■□□□□ 0.04
SHANK2-210ENST00000449116 TRMT1Q9NXH9 659 aaKnown RBP15.31■□□□□ 0.04
SHANK2-210ENST00000449116 TRIM10Q9UDY6 481 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 LCMT1Q9UIC8 334 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 ANAPC7Q9UJX3 599 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 STAP1Q9ULZ2 295 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 NAALADL1Q9UQQ1 740 aa15.31■□□□□ 0.04
SHANK2-210ENST00000449116 A0A1W2PRU2 124 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 MACROD2A1Z1Q3 448 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 GOLGA6L9A6NEM1 432 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 MYO1FO00160 1098 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 DPYSL4O14531 572 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 ZNF197O14709 1029 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 BUB1O43683 1085 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 TLR5O60602 858 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 SDC4P31431 198 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 CCR2P41597 374 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 ZNF143P52747 638 aaPredicted RBP15.3■□□□□ 0.04
SHANK2-210ENST00000449116 NAP1L1P55209 391 aaKnown RBP15.3■□□□□ 0.04
SHANK2-210ENST00000449116 NTHL1P78549 312 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 IFI16Q16666 785 aaKnown RBP15.3■□□□□ 0.04
SHANK2-210ENST00000449116 PRSS36Q5K4E3 855 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 HECTD3Q5T447 861 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 SYPL2Q5VXT5 272 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 CES5AQ6NT32 575 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 TRNP1Q6NT89 227 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 RSRC2Q7L4I2 434 aaKnown RBP15.3■□□□□ 0.04
SHANK2-210ENST00000449116 ZNF276Q8N554 614 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 RNF10Q8N5U6 811 aaKnown RBP15.3■□□□□ 0.04
SHANK2-210ENST00000449116 SHKBP1Q8TBC3 707 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 RNF139Q8WU17 664 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 MSLNLQ96KJ4 702 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 DDX23Q9BUQ8 820 aaKnown RBP15.3■□□□□ 0.04
SHANK2-210ENST00000449116 TRIM7Q9C029 511 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 S1PR5Q9H228 398 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 OLA1Q9NTK5 396 aaKnown RBP15.3■□□□□ 0.04
SHANK2-210ENST00000449116 RRN3Q9NYV6 651 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.3■□□□□ 0.04
SHANK2-210ENST00000449116 IP6K2Q9UHH9 426 aa15.3■□□□□ 0.04
SHANK2-210ENST00000449116 SALL4Q9UJQ4 1053 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms