RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MTMR10Q9NXD2 777 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 RNF112Q9ULX5 631 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 SCAF8Q9UPN6 1271 aaKnown RBP9.19□□□□□ -0.94
NIPBL-202ENST00000448238 JAK2O60674 1132 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 MSL3P1P0C860 447 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 SMIM11AP58511 58 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 KCTD21Q4G0X4 260 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 MIIPQ5JXC2 388 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 MFSD14BQ5SR56 506 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 KLHL23Q8NBE8 558 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 BHMTQ93088 406 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 ST3GAL5Q9UNP4 418 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 RPS6KA4O75676 772 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 CSN2P05814 226 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 AXLP30530 894 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 SLC26A3P40879 764 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 CCNG1P51959 295 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 GXYLT1Q4G148 440 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 FAM173BQ6P4H8 233 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 CCNJLQ8IV13 435 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 RFFLQ8WZ73 363 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 NSMCE2Q96MF7 247 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 MCCC1Q96RQ3 725 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-202ENST00000448238 SIK2Q9H0K1 926 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 PCIF1Q9H4Z3 704 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 RETREG1Q9H6L5 497 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 TSPAN1O60635 241 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 VPS26AO75436 327 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 PLA2G4BP0C869 781 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 CLUP10909 449 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 CTDSPL2Q05D32 466 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 VMACQ2NL98 169 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 SUPT20HL1Q3ZLR7 823 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 MOV10Q9HCE1 1003 aaKnown RBP9.19□□□□□ -0.94
NIPBL-202ENST00000448238 SLC40A1Q9NP59 571 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.19□□□□□ -0.94
NIPBL-202ENST00000448238 PCDHGA10Q9Y5H3 936 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 RECQL5O94762 991 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-202ENST00000448238 NAPEPLDQ6IQ20 393 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-202ENST00000448238 AGMOQ6ZNB7 445 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 BBS1Q8NFJ9 593 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 FAM120BQ96EK7 910 aaKnown RBP9.19□□□□□ -0.94
NIPBL-202ENST00000448238 CYP3A43Q9HB55 503 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 DYRK1BQ9Y463 629 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 ARL5AQ9Y689 179 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 FAM135BQ49AJ0 1406 aa9.19□□□□□ -0.94
NIPBL-202ENST00000448238 PLIN3O60664 434 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 RSL1D1O76021 490 aaKnown RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 ZNF3P17036 446 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 CORO7P57737 925 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 CLEC4GQ6UXB4 293 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 PACS2Q86VP3 889 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 DNAJA4Q8WW22 397 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 APOL5Q9BWW9 433 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 CAPN10Q9HC96 672 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 NEU2Q9Y3R4 380 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 UBN2Q6ZU65 1347 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 MAP3K5Q99683 1374 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 B8ZZF3 427 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 PPM1BO75688 479 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 VIL1P09327 827 aaKnown RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 TMBIM6P55061 237 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 RPP38P78345 283 aaKnown RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 NEDD8Q15843 81 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 DUOXA2Q1HG44 320 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 POC1BQ8TC44 478 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 SGF29Q96ES7 293 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 MYL10Q9BUA6 226 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 SPATA5L1Q9BVQ7 753 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 CINPQ9BW66 212 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 MUC3BQ9H195 1237 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 SSR3Q9UNL2 185 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 PCYT1BQ9Y5K3 369 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 FRMPD2Q68DX3 1309 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 BTBD19C9JJ37 291 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 CLOCKO15516 846 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 KRT33AO76009 404 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 FDPSP14324 419 aaKnown RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 CHRM3P20309 590 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 GPC3P51654 580 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 CDC42EP1Q00587 391 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 HKDC1Q2TB90 917 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 IFNLR1Q8IU57 520 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 CLVS1Q8IUQ0 354 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 SPATA2LQ8IUW3 424 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-202ENST00000448238 SEC31BQ9NQW1 1179 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 SH3GLB2Q9NR46 395 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 PARD3Q8TEW0 1356 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 RLN1P04808 185 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 FUT11Q495W5 492 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 PLA2G4FQ68DD2 849 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 DENND5AQ6IQ26 1287 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 TMEM132CQ8N3T6 1108 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 PFDN5Q99471 154 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 BABAM1Q9NWV8 329 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 NCKIPSDQ9NZQ3 722 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 RLN2P04090 185 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 PTPN6P29350 595 aa9.18□□□□□ -0.94
NIPBL-202ENST00000448238 BHLHB9Q6PI77 547 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms