RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 DMP1Q13316 513 aaPredicted RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 PPP1R18Q6NYC8 613 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 LRRC8DQ7L1W4 858 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 CCDC36Q8IYA8 594 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 MINDY2Q8NBR6 621 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 DAGLBQ8NCG7 672 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 WDR36Q8NI36 951 aaKnown RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 WNK4Q96J92 1243 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 TMEM120AQ9BXJ8 343 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 PLCL2Q9UPR0 1127 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 H7C0S8 307 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 PPEF1O14829 653 aaPredicted RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 BMP3P12645 472 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 PRLRP16471 622 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 PEX3P56589 373 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 VBP1P61758 197 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 PDIA5Q14554 519 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 SLC9A4Q6AI14 798 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 RNF135Q8IUD6 432 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 DEFB107AQ8IZN7 70 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 DQX1Q8TE96 717 aaKnown RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 C18orf8Q96DM3 657 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 ROGDIQ9GZN7 287 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 TRMT6Q9UJA5 497 aaKnown RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 FNDC3AQ9Y2H6 1198 aaKnown RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 PMF1-BGLAPU3KQ54 211 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 EFCAB10A6NFE3 127 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 DDX5P17844 614 aaKnown RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 TFE3P19532 575 aaPredicted RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 CCNA2P20248 432 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 RAB15P59190 212 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 GTF2H3Q13889 308 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 OR6B2Q6IFH4 312 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 OR6Y1Q8NGX8 325 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 FBXO25Q8TCJ0 367 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 CASS4Q9NQ75 786 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 KLHL8Q9P2G9 620 aaPredicted RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 USP20Q9Y2K6 914 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 COQ6Q9Y2Z9 468 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 HEY1Q9Y5J3 304 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 BAZ2AQ9UIF9 1905 aaKnown RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 TRPM3Q9HCF6 1732 aaPredicted RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 STMND1H3BQB6 276 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 HNRNPDLO14979 420 aaKnown RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 RAD17O75943 681 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 EIF2AK2P19525 551 aaKnown RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 OSBPP22059 807 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 ITGA1P56199 1179 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 RAB25P57735 213 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 IL5RAQ01344 420 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 TAF5Q15542 800 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 LIN52Q52LA3 116 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 ZNF394Q53GI3 561 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 KCNT1Q5JUK3 1230 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 CCSAPQ6IQ19 270 aaPredicted RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 AMER2Q8N7J2 671 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 OSCP1Q8WVF1 389 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 HAS1Q92839 578 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 SAR1AQ9NR31 198 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 ABCB11O95342 1321 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 EMSYQ7Z589 1322 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 TMEM150BA6NC51 233 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 FOXO6A8MYZ6 492 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 SLC16A4O15374 487 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 CYP26A1O43174 497 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 WEE2P0C1S8 567 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 FASP25445 335 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 AP1S2P56377 157 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 SRP54P61011 504 aaKnown RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 NFIL3Q16649 462 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 AARS2Q5JTZ9 985 aaKnown RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 SYDE2Q5VT97 1194 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 DENND5AQ6IQ26 1287 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 NCCRP1Q6ZVX7 275 aaPredicted RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 TPCN2Q8NHX9 752 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 HDAC2Q92769 488 aaKnown RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 KAT2BQ92831 832 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ZNF668Q96K58 619 aaPredicted RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 ACCSQ96QU6 501 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 BIRC5O15392 142 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 POLR2MP0CAP2 368 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ATF6P18850 670 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 STARP49675 285 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.891e-6■■■■■ 27.8
SMC6-207ENST00000448223 USP11P51784 963 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 CLCN2P51788 898 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 KCNK10P57789 538 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 POLD3Q15054 466 aaPredicted RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 SMAD1Q15797 465 aaKnown RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 PGBD2Q6P3X8 592 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 HACE1Q8IYU2 909 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 SLC20A1Q8WUM9 679 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 ZNF285Q96NJ3 590 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 PURBQ96QR8 312 aaKnown RBP9.49□□□□□ -0.89
SMC6-207ENST00000448223 RBBP8Q99708 897 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 TMEM206Q9H813 350 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 TAS2R14Q9NYV8 317 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 GINS2Q9Y248 185 aa9.49□□□□□ -0.89
SMC6-207ENST00000448223 TRMUO75648 421 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms