RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 SNX30Q5VWJ9 437 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 BSPRYQ5W0U4 402 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 MAP1SQ66K74 1059 aaPredicted RBP13.41□□□□□ -0.26
SHC1-210ENST00000448116 ANO7Q6IWH7 933 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 TRNP1Q6NT89 227 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 ZCCHC23Q6ZST2 131 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 FAM183BPQ6ZVS7 135 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 MAP7D3Q8IWC1 876 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 KLRG1Q96E93 195 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 HPDLQ96IR7 371 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 SPATA33Q96N06 139 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 RNF157Q96PX1 679 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 PPP1R12CQ9BZL4 782 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 NR2E3Q9Y5X4 410 aa13.41□□□□□ -0.26
SHC1-210ENST00000448116 TOP3BO95985 862 aaKnown RBP13.4□□□□□ -0.26
SHC1-210ENST00000448116 YY1P25490 414 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 CCNG1P51959 295 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 KCNJ11Q14654 390 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 CASC4Q6P4E1 433 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.4□□□□□ -0.26
SHC1-210ENST00000448116 NDUFAF2Q8N183 169 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 PLD5Q8N7P1 536 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 TUBB6Q9BUF5 446 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 VPS33BQ9H267 617 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 TMEM165Q9HC07 324 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 FAM49BQ9NUQ9 324 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 PAK5Q9P286 719 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.4□□□□□ -0.26
SHC1-210ENST00000448116 ALDH18A1P54886 795 aaKnown RBP13.4□□□□□ -0.26
SHC1-210ENST00000448116 TAZQ16635 292 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 CA9Q16790 459 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 LGSNQ5TDP6 509 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 E2F7Q96AV8 911 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 PTCD3Q96EY7 689 aaKnown RBP13.4□□□□□ -0.26
SHC1-210ENST00000448116 MCRS1Q96EZ8 462 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 MAF1Q9H063 256 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 KLC2Q9H0B6 622 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 PIH1D1Q9NWS0 290 aaKnown RBP13.4□□□□□ -0.26
SHC1-210ENST00000448116 ZNF112Q9UJU3 913 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 TSPAN16Q9UKR8 245 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 ARID2Q68CP9 1835 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 SMAPO00193 183 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 APOL1O14791 398 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 HNRNPCL1O60812 293 aaKnown RBP13.4□□□□□ -0.26
SHC1-210ENST00000448116 CILPO75339 1184 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 LMNAP02545 664 aaKnown RBP13.4□□□□□ -0.26
SHC1-210ENST00000448116 IQCF3P0C7M6 154 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 ATP6V1C1P21283 382 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 CCNHP51946 323 aaPredicted RBP13.4□□□□□ -0.26
SHC1-210ENST00000448116 TRMT10BQ6PF06 316 aaKnown RBP13.4□□□□□ -0.26
SHC1-210ENST00000448116 SCUBE3Q8IX30 993 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 NETO2Q8NC67 525 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 NMRK1Q9NWW6 199 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 GGA3Q9NZ52 723 aa13.4□□□□□ -0.26
SHC1-210ENST00000448116 DPPA5A6NC42 116 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 NFKBIEO00221 500 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 FAM163BP0C2L3 166 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 SLC18A2Q05940 514 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 CDCA2Q69YH5 1023 aaPredicted RBP13.39□□□□□ -0.27
SHC1-210ENST00000448116 TEX9Q8N6V9 391 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 ENDOVQ8N8Q3 282 aaKnown RBP13.39□□□□□ -0.27
SHC1-210ENST00000448116 FAM172AQ8WUF8 416 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 SKA1Q96BD8 255 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 MAGEB5Q9BZ81 275 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 USP29Q9HBJ7 922 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 RNF19AQ9NV58 838 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 GINS2Q9Y248 185 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 COQ9O75208 318 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 DHRS4L1P0CG22 281 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 AQP5P55064 265 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 FAM47CQ5HY64 1035 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 TMEM154Q6P9G4 183 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 CHSY1Q86X52 802 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 FBXO16Q8IX29 292 aaPredicted RBP13.39□□□□□ -0.27
SHC1-210ENST00000448116 C7orf31Q8N865 590 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 FBXO27Q8NI29 283 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 CLPTM1LQ96KA5 538 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 GPR20Q99678 358 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 BCO2Q9BYV7 579 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 SMYD2Q9NRG4 433 aa13.39□□□□□ -0.27
SHC1-210ENST00000448116 COL11A1P12107 1806 aaPredicted RBP13.39□□□□□ -0.27
SHC1-210ENST00000448116 E7ENQ6 273 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 CHADO15335 359 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 VDRP11473 427 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 RPS12P25398 132 aaKnown RBP13.38□□□□□ -0.27
SHC1-210ENST00000448116 VHLP40337 213 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 GRIA1P42261 906 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 C11orf91Q3C1V1 193 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 CFAP61Q8NHU2 1237 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 TRPM4Q8TD43 1214 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
SHC1-210ENST00000448116 TLE6Q9H808 572 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 ETNK2Q9NVF9 386 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 CORO1CQ9ULV4 474 aaPredicted RBP13.38□□□□□ -0.27
SHC1-210ENST00000448116 A0A087WZ62 844 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 C2CD4BA6NLJ0 364 aa13.38□□□□□ -0.27
SHC1-210ENST00000448116 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms