RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 PDIA2Q13087 525 aaKnown RBP20.32■□□□□ 0.84
FAM3A-215ENST00000447601 DSC3Q14574 896 aa20.32■□□□□ 0.84
FAM3A-215ENST00000447601 ZBED8Q8IZ13 594 aa20.32■□□□□ 0.84
FAM3A-215ENST00000447601 MYCBPAPQ8TBZ2 947 aa20.32■□□□□ 0.84
FAM3A-215ENST00000447601 ARHGEF2Q92974 986 aaKnown RBP20.32■□□□□ 0.84
FAM3A-215ENST00000447601 PGBD4Q96DM1 585 aa20.32■□□□□ 0.84
FAM3A-215ENST00000447601 DHX35Q9H5Z1 703 aaKnown RBP20.32■□□□□ 0.84
FAM3A-215ENST00000447601 UBN1Q9NPG3 1134 aa20.32■□□□□ 0.84
FAM3A-215ENST00000447601 KRT82Q9NSB4 513 aa20.32■□□□□ 0.84
FAM3A-215ENST00000447601 RNF186Q9NXI6 227 aa20.32■□□□□ 0.84
FAM3A-215ENST00000447601 CDH9Q9ULB4 789 aa20.32■□□□□ 0.84
FAM3A-215ENST00000447601 A0A0U1RQF3 1178 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 CASTOR2A6NHX0 329 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 SKIP12755 728 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 CHN1P15882 459 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 IGFBP6P24592 240 aaPredicted RBP20.31■□□□□ 0.84
FAM3A-215ENST00000447601 CYP2F1P24903 491 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 SEC24CP53992 1094 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 YWHAZP63104 245 aaKnown RBP20.31■□□□□ 0.84
FAM3A-215ENST00000447601 LPIN1Q14693 890 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 UPP1Q16831 310 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 KIAA0319Q5VV43 1072 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 RNF180Q86T96 592 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 EXOC3L1Q86VI1 746 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 PSTKQ8IV42 348 aaKnown RBP20.31■□□□□ 0.84
FAM3A-215ENST00000447601 DEFB106AQ8N104 65 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 MDM1Q8TC05 714 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 RTP4Q96DX8 246 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 CCT8L2Q96SF2 557 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 NRDE2Q9H7Z3 1164 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 CRTAC1Q9NQ79 661 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 HEY1Q9Y5J3 304 aa20.31■□□□□ 0.84
FAM3A-215ENST00000447601 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.31■□□□□ 0.84
FAM3A-215ENST00000447601 BCLAF3A2AJT9 711 aaKnown RBP20.3■□□□□ 0.84
FAM3A-215ENST00000447601 MGEA5O60502 916 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 BEST1O76090 585 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 TOMM70O94826 608 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 FBXO21O94952 628 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 PAX3P23760 479 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 PCSK1P29120 753 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 SULT1E1P49888 294 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 BASP1P80723 227 aaKnown RBP20.3■□□□□ 0.84
FAM3A-215ENST00000447601 ITGA7Q13683 1181 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 FAM26DQ5JW98 314 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 ANKRD22Q5VYY1 191 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 REM2Q8IYK8 340 aaPredicted RBP20.3■□□□□ 0.84
FAM3A-215ENST00000447601 RNF169Q8NCN4 708 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 C3orf58Q8NDZ4 430 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 ZNF473Q8WTR7 871 aaKnown RBP20.3■□□□□ 0.84
FAM3A-215ENST00000447601 XPO6Q96QU8 1125 aaKnown RBP20.3■□□□□ 0.84
FAM3A-215ENST00000447601 ADAM33Q9BZ11 813 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 PPCSQ9HAB8 311 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 PAK5Q9P286 719 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 STAP1Q9ULZ2 295 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 PTCH2Q9Y6C5 1203 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 EXOC1LA0A1B0GW35 172 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 GOLGA8MH3BSY2 632 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 ODC1P11926 461 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 NOS2P35228 1153 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 ATXN1P54253 815 aaKnown RBP20.3■□□□□ 0.84
FAM3A-215ENST00000447601 MAP3K7CLP57077 242 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 FASTKD3Q14CZ7 662 aaKnown RBP20.3■□□□□ 0.84
FAM3A-215ENST00000447601 B4GALNT4Q76KP1 1039 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 FAM35AQ86V20 835 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 VPS37BQ9H9H4 285 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 INTS9Q9NV88 658 aaKnown RBP20.3■□□□□ 0.84
FAM3A-215ENST00000447601 CTNNAL1Q9UBT7 734 aa20.3■□□□□ 0.84
FAM3A-215ENST00000447601 DDX20Q9UHI6 824 aaKnown RBP20.3■□□□□ 0.84
FAM3A-215ENST00000447601 XPO7Q9UIA9 1087 aaKnown RBP20.3■□□□□ 0.84
FAM3A-215ENST00000447601 AP1G2O75843 785 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 ZBED1O96006 694 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 HOXD10P28358 340 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 CAP1Q01518 475 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 PPARDQ03181 441 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 GRIK3Q13003 919 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 CCDC38Q502W7 563 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 DCAF6Q58WW2 860 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 CDKL3Q8IVW4 592 aaPredicted RBP20.29■□□□□ 0.84
FAM3A-215ENST00000447601 PDIK1LQ8N165 341 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 CCDC185Q8N715 623 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 SLC2A13Q96QE2 648 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 ADAM2Q99965 735 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 OSBPL7Q9BZF2 842 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 PRDM16Q9HAZ2 1276 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 USP29Q9HBJ7 922 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 GPBP1L1Q9HC44 474 aaPredicted RBP20.29■□□□□ 0.84
FAM3A-215ENST00000447601 RCOR3Q9P2K3 495 aaPredicted RBP20.29■□□□□ 0.84
FAM3A-215ENST00000447601 TIMM13Q9Y5L4 95 aaPredicted RBP20.29■□□□□ 0.84
FAM3A-215ENST00000447601 SQORQ9Y6N5 450 aa20.29■□□□□ 0.84
FAM3A-215ENST00000447601 E7ESA3 106 aa20.28■□□□□ 0.84
FAM3A-215ENST00000447601 KCNN4O15554 427 aa20.28■□□□□ 0.84
FAM3A-215ENST00000447601 PHBP35232 272 aa20.28■□□□□ 0.84
FAM3A-215ENST00000447601 NR2C2P49116 596 aa20.28■□□□□ 0.84
FAM3A-215ENST00000447601 TKTL1P51854 596 aa20.28■□□□□ 0.84
FAM3A-215ENST00000447601 RNASELQ05823 741 aaKnown RBP20.28■□□□□ 0.84
FAM3A-215ENST00000447601 XRCC4Q13426 336 aa20.28■□□□□ 0.84
FAM3A-215ENST00000447601 TRIM71Q2Q1W2 868 aaKnown RBP20.28■□□□□ 0.84
FAM3A-215ENST00000447601 MAP3K21Q5TCX8 1036 aa20.28■□□□□ 0.84
FAM3A-215ENST00000447601 C4orf22Q6V702 233 aa20.28■□□□□ 0.84
FAM3A-215ENST00000447601 SPATS2Q86XZ4 545 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms