RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 KCTD13Q8WZ19 329 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 MTMR10Q9NXD2 777 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 CTNNAL1Q9UBT7 734 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 GOLGA8MH3BSY2 632 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 RPL9P32969 192 aaKnown RBP18.18■□□□□ 0.5
SMC6-206ENST00000446852 PITX1P78337 314 aaPredicted RBP18.18■□□□□ 0.5
SMC6-206ENST00000446852 MRPS5P82675 430 aaKnown RBP18.18■□□□□ 0.5
SMC6-206ENST00000446852 PAN2Q504Q3 1202 aaKnown RBP18.18■□□□□ 0.5
SMC6-206ENST00000446852 FAM26DQ5JW98 314 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 DARS2Q6PI48 645 aaKnown RBP18.18■□□□□ 0.5
SMC6-206ENST00000446852 RNF180Q86T96 592 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 VSIG1Q86XK7 387 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 NAT8LQ8N9F0 302 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 MDM1Q8TC05 714 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 FAM149B1Q96BN6 582 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 PCED1BQ96HM7 432 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 DHX35Q9H5Z1 703 aaKnown RBP18.18■□□□□ 0.5
SMC6-206ENST00000446852 AP4E1Q9UPM8 1137 aa18.18■□□□□ 0.5
SMC6-206ENST00000446852 APOL1O14791 398 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 CAPN15O75808 1086 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 MAP3K6O95382 1288 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 FAM200BP0CF97 657 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 MMP13P45452 471 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 CACNA2D1P54289 1103 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 CCDC38Q502W7 563 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 FAM35AQ86V20 835 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 PPIL6Q8IXY8 311 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 SERPINB12Q96P63 405 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 HEY1Q9Y5J3 304 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 PTPRDP23468 1912 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 TCRBV7S3A2A0A539 114 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 BANF1O75531 89 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 DAB1O75553 588 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 TCEA3O75764 348 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 TGM2P21980 687 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 SEC24CP53992 1094 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 BCAR1P56945 870 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 SLC25A52Q3SY17 297 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 CEP128Q6ZU80 1094 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 STRADAQ7RTN6 431 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 SMOQ99835 787 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 RTP3Q9BQQ7 232 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 EPN3Q9H201 632 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 LRRC4Q9HBW1 653 aa18.17■□□□□ 0.5
SMC6-206ENST00000446852 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.17■□□□□ 0.5
SMC6-206ENST00000446852 TRPA1O75762 1119 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 CYP2F1P24903 491 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 SULT1E1P49888 294 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 TKTL1P51854 596 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 YWHAZP63104 245 aaKnown RBP18.16■□□□□ 0.5
SMC6-206ENST00000446852 DCAF6Q58WW2 860 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 CD300LGQ6UXG3 332 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 HFE2Q6ZVN8 426 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 GPRIN1Q7Z2K8 1008 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 PCGF5Q86SE9 256 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 ZMIZ2Q8NF64 920 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 KCTD15Q96SI1 283 aaPredicted RBP18.16■□□□□ 0.5
SMC6-206ENST00000446852 KCNK16Q96T55 309 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 NRDE2Q9H7Z3 1164 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 USP29Q9HBJ7 922 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 INPP5FQ9Y2H2 1132 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 NLRC5Q86WI3 1866 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 ZNF487B1APH4 448 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 H7C0C1 242 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 AP1G2O75843 785 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 TMEM63AO94886 807 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 ABHD2P08910 425 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 BRCC3P46736 316 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 ATP5OP48047 213 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 DEFB115Q30KQ5 88 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 FAM131BQ86XD5 332 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 ZBED8Q8IZ13 594 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 SIX6OS1Q8N1H7 587 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 HASPINQ8TF76 798 aa18.16■□□□□ 0.5
SMC6-206ENST00000446852 CNOT10Q9H9A5 744 aaKnown RBP18.16■□□□□ 0.5
SMC6-206ENST00000446852 FOXO6A8MYZ6 492 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 NDC80O14777 642 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 NRP1O14786 923 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 CABYRO75952 493 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 B3GAT3O94766 335 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 STIP1P31948 543 aaKnown RBP18.15■□□□□ 0.5
SMC6-206ENST00000446852 PDIA2Q13087 525 aaKnown RBP18.15■□□□□ 0.5
SMC6-206ENST00000446852 HIF1AQ16665 826 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 SYPL2Q5VXT5 272 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 BNIPLQ7Z465 357 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 EXOC3L1Q86VI1 746 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 PYROXD2Q8N2H3 581 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 MYCBPAPQ8TBZ2 947 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 LRRN4Q8WUT4 740 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 NT5C3BQ969T7 300 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 RHOBTB2Q9BYZ6 727 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 STMN4Q9H169 189 aaPredicted RBP18.15■□□□□ 0.5
SMC6-206ENST00000446852 TRPV6Q9H1D0 765 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 PPANQ9NQ55 473 aaKnown RBP18.15■□□□□ 0.5
SMC6-206ENST00000446852 CDH9Q9ULB4 789 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.15■□□□□ 0.5
SMC6-206ENST00000446852 ALOX15BO15296 676 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 GRIK3Q13003 919 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 MSS51Q4VC12 460 aa18.15■□□□□ 0.5
SMC6-206ENST00000446852 FNBP1LQ5T0N5 605 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms