RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SEPT3Q9UH03 358 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 ALG6Q9Y672 507 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 ERI2A8K979 691 aaKnown RBP8.82□□□□□ -1
PTPN3-204ENST00000446349 CCR3P51677 355 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 EFEMP1Q12805 493 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 C6orf10Q5SRN2 563 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 ERMARDQ5T6L9 678 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 DEFB128Q7Z7B8 93 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 CISHQ9NSE2 258 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 GIT1Q9Y2X7 761 aa8.82□□□□□ -1
PTPN3-204ENST00000446349 CCNG2Q16589 344 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 MAP1SQ66K74 1059 aaPredicted RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 DNAJB3Q8WWF6 145 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 ZNF669Q96BR6 464 aaPredicted RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 ERP44Q9BS26 406 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 ILKAPQ9H0C8 392 aaPredicted RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 ZDHHC4Q9NPG8 344 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 PCDH8O95206 1070 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 COMTP21964 271 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 LRRC6Q86X45 466 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 ATP5C1P36542 298 aaKnown RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 MDH1BQ5I0G3 518 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 HORMAD1Q86X24 394 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 ZNF333Q96JL9 665 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 L3MBTL3Q96JM7 780 aaPredicted RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 GLIS2Q9BZE0 524 aaPredicted RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 KLHL28Q9NXS3 571 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 SOX13Q9UN79 622 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 VPS4BO75351 444 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 PYGMP11217 842 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 CXCR2P25025 360 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 CASP1P29466 404 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 MAGEA4P43358 317 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 NPY2RP49146 381 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 PKN2Q16513 984 aaKnown RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 BRSK2Q8IWQ3 736 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 SETD4Q9NVD3 440 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 CDH9Q9ULB4 789 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 MYBL2P10244 700 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 SERPINA4P29622 427 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 CDC25CP30307 473 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 PRIM2P49643 509 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 CLCN6P51797 869 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 TKTL1P51854 596 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 ANTXR2P58335 489 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 USP41Q3LFD5 358 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 MTSS1LQ765P7 747 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 LCA5Q86VQ0 697 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 HELQQ8TDG4 1101 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 NMRK2Q9NPI5 230 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 KCTD5Q9NXV2 234 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 AP4E1Q9UPM8 1137 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 KATNA1O75449 491 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 MPOP05164 745 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 PTPRAP18433 802 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 SHMT1P34896 483 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 FXR1P51114 621 aaKnown RBP eCLIP8.81□□□□□ -1
PTPN3-204ENST00000446349 CDK16Q00536 496 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 VGLL4Q14135 290 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 ALG11Q2TAA5 492 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 TMEM159Q96B96 161 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 SENP6Q9GZR1 1112 aaPredicted RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 ATXN3LQ9H3M9 355 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 MRPS17Q9Y2R5 130 aaKnown RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 F8W810 466 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 MAGEC1O60732 1142 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 SNRPD1P62314 119 aaKnown RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.81□□□□□ -1
PTPN3-204ENST00000446349 LRRC74AQ0VAA2 488 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 ICE2Q659A1 982 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 ZNF507Q8TCN5 953 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 BLOC1S5Q8TDH9 187 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 USP33Q8TEY7 942 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 DACH2Q96NX9 599 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 RPS6KB2Q9UBS0 482 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 VTI1BQ9UEU0 232 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 DNMT3LQ9UJW3 386 aa8.81□□□□□ -1
PTPN3-204ENST00000446349 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.81□□□□□ -1
PTPN3-204ENST00000446349 ZNF286BP0CG31 522 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 TPBGLP0DKB5 382 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 KITP10721 976 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 HSPA13P48723 471 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 CRYBB1P53674 252 aaPredicted RBP8.8□□□□□ -1
PTPN3-204ENST00000446349 SF3A3Q12874 501 aaKnown RBP eCLIP8.8□□□□□ -1
PTPN3-204ENST00000446349 SLC25A41Q8N5S1 370 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 RIN3Q8TB24 985 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 SIKE1Q9BRV8 207 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 SCN3BQ9NY72 215 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 AMACRQ9UHK6 382 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 PLAGL2Q9UPG8 496 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 APOA1P02647 267 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 ATXN8OSP0DMR3 200 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 PON1P27169 355 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 MAP3K7CLP57077 242 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 C11orf63Q6NUN7 778 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 FBXO22Q8NEZ5 403 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 VPS33AQ96AX1 596 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 ANKRD6Q9Y2G4 727 aa8.8□□□□□ -1
PTPN3-204ENST00000446349 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms