RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 MAN2B2Q9Y2E5 1009 aa5.16□□□□□ -1.58
HMGB1P48-201ENST00000446155 ARHGEF17Q96PE2 2063 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P48-201ENST00000446155 FNDC1Q4ZHG4 1894 aaPredicted RBP5.15□□□□□ -1.58
HMGB1P48-201ENST00000446155 CCDC151A5D8V7 595 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 RRN3P2A6NIE6 340 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 LINC00473A8K010 186 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 PLA2G6O60733 806 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 RAMP2O60895 175 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 SKAP2O75563 359 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 NXPH3O95157 252 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 NR2F6P10588 404 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 HGFP14210 728 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 PLA2G5P39877 138 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 RXRGP48443 463 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 ITGA8P53708 1063 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 EIF5P55010 431 aaKnown RBP5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 TIRAPP58753 221 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 CYP1B1Q16678 543 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 GGT6Q6P531 493 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 C1orf131Q8NDD1 294 aaKnown RBP5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 SMCR8Q8TEV9 937 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 R3HDM4Q96D70 268 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 LRRC46Q96FV0 321 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZNF668Q96K58 619 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 VN1R3Q9BXE9 311 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 MAGEB5Q9BZ81 275 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 GRHPRQ9UBQ7 328 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 RIMKLBQ9ULI2 386 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 RABGAP1Q9Y3P9 1069 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 CEP83Q9Y592 693 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 DMRT1Q9Y5R6 373 aa5.15□□□□□ -1.59
HMGB1P48-201ENST00000446155 FAM234BA2RU67 622 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 CCER2I3L3R5 266 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 TCERG1O14776 1098 aaKnown RBP5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 RGS10O43665 173 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 MBD4O95243 580 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 NDST3O95803 873 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 FESP07332 822 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 ARP10275 920 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 VEGFAP15692 232 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 EGR1P18146 543 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 MST1P26927 711 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 ITPKBP27987 946 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 EPHA3P29320 983 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 SLC5A2P31639 672 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 HTR7P34969 479 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 ALDH9A1P49189 494 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 GALNT1Q10472 559 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 G3BP1Q13283 466 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 PRKG1Q13976 671 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 CRTC1Q6UUV9 634 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 C1orf122Q6ZSJ8 110 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 RFX8Q6ZV50 586 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZNF551Q7Z340 670 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 KRT73Q86Y46 540 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 TXLNBQ8N3L3 684 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 GLIS1Q8NBF1 620 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 GPR150Q8NGU9 434 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 USP13Q92995 863 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZNF566Q969W8 418 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 SORCS2Q96PQ0 1159 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 RMDN3Q96TC7 470 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 MAGEH1Q9H213 219 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 IKZF4Q9H2S9 585 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 PRDM13Q9H4Q3 707 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 TMEM8AQ9HCN3 771 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 TRIM36Q9NQ86 728 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 ITM2CQ9NQX7 267 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 RASSF1Q9NS23 344 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 DLL3Q9NYJ7 618 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 RGL1Q9NZL6 768 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 DNAJB11Q9UBS4 358 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 HPSEQ9Y251 543 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 CRYL1Q9Y2S2 319 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 COL15A1P39059 1388 aa5.14□□□□□ -1.59
HMGB1P48-201ENST00000446155 A0A0U1RQG5 324 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 OR2W5A6NFC9 320 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 EYA2O00167 538 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 EIF3FO00303 357 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 HNRNPDLO14979 420 aaKnown RBP5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 PRKAR1BP31321 381 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 ATICP31939 592 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 PGDP52209 483 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 ARL4CP56559 192 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 MPP1Q00013 466 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 FSTL1Q12841 308 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 POSTNQ15063 836 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 TAF12Q16514 161 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 SLC5A9Q2M3M2 681 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 ZACNQ401N2 412 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 RAP1GAP2Q684P5 730 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 RETSATQ6NUM9 610 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 MZT2BQ6NZ67 158 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 FAM180BQ6P0A1 224 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 CFAP161Q6P656 301 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 OLFML1Q6UWY5 402 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 USP49Q70CQ1 688 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 CAND1Q86VP6 1230 aaKnown RBP5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 CCDC28AQ8IWP9 274 aa5.13□□□□□ -1.59
HMGB1P48-201ENST00000446155 SUGP1Q8IWZ8 645 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms