RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 DEFB106AQ8N104 65 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 PQLC3Q8N755 202 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 B3GALNT2Q8NCR0 500 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 TRIB2Q92519 343 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 CFAP36Q96G28 342 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 WDR83Q9BRX9 315 aaKnown RBP17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 TMEM109Q9BVC6 243 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 ETNK2Q9NVF9 386 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 MIOSQ9NXC5 875 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 MANSC4A6NHS7 340 aaPredicted RBP17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 H0YHG0 523 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 HAS3O00219 553 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 APRTP07741 180 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 CYP2F1P24903 491 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 PTPN7P35236 360 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 MAP2K2P36507 400 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 CLCNKBP51801 687 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 ANKRD52Q8NB46 1076 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 LAMA3Q16787 3333 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 CLUHO75153 1309 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 CREB3O43889 395 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 ELNP15502 786 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 AMPD1P23109 780 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 GCAP28676 217 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 ARL4CP56559 192 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 STAT4Q14765 748 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 RPAINQ86UA6 219 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 FBF1Q8TES7 1133 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 SPOCK2Q92563 424 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 KCNK16Q96T55 309 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 ZFYVE28Q9HCC9 887 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 AP4E1Q9UPM8 1137 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 CAPN7Q9Y6W3 813 aa17.5■□□□□ 0.39
LAPTM4B-201ENST00000445593 WDR91A4D1P6 747 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 THPOP40225 353 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 SULT1E1P49888 294 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 NOMO1Q15155 1222 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 BSPRYQ5W0U4 402 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 HFE2Q6ZVN8 426 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 SHOC2Q9UQ13 582 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 STAU1O95793 577 aaKnown RBP17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 GOT1P17174 413 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 ELK3P41970 407 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 FLT3LGP49771 235 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 STILQ15468 1287 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 KIAA0319Q5VV43 1072 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 CROCCP2Q86T23 111 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 FUKQ8N0W3 1084 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 C3orf58Q8NDZ4 430 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 ZNF317Q96PQ6 595 aaPredicted RBP17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 KATNAL1Q9BW62 490 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 AGO3Q9H9G7 860 aaKnown RBP17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 KRT82Q9NSB4 513 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 DDX43Q9NXZ2 648 aaKnown RBP17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 SEPT10Q9P0V9 454 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 DERAQ9Y315 318 aa17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 FARP1Q9Y4F1 1045 aaPredicted RBP17.49■□□□□ 0.39
LAPTM4B-201ENST00000445593 MNAT1P51948 309 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 TFDP2Q14188 446 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 SV2CQ496J9 727 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 CCDC121Q6ZUS5 278 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 PDIK1LQ8N165 341 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 TTC39CQ8N584 583 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 NAT8LQ8N9F0 302 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 LRRC4Q9HBW1 653 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 ALG13Q9NP73 1137 aaKnown RBP17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 NKIRAS1Q9NYS0 192 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 ZSWIM8A7E2V4 1837 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 CD52P31358 61 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 CDC42EP1Q00587 391 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 FBXW10Q5XX13 1052 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 DSTYKQ6XUX3 929 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 TSPYL2Q9H2G4 693 aaPredicted RBP17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 XPOTO43592 962 aaKnown RBP17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 GNAT1P11488 350 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 DESP17661 470 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 YY1P25490 414 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 ATP5DP30049 168 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 GSCP56915 257 aaPredicted RBP17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 MRPS6P82932 125 aaKnown RBP17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 BOLA3Q53S33 107 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 SYPL2Q5VXT5 272 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 MICALCLQ6ZW33 695 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 UNC93AQ86WB7 457 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 SENP8Q96LD8 212 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 KCTD15Q96SI1 283 aaPredicted RBP17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 PLCD4Q9BRC7 762 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 TRABDQ9H4I3 376 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 FAM105AQ9NUU6 356 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 SAMD15Q9P1V8 674 aa17.48■□□□□ 0.39
LAPTM4B-201ENST00000445593 MYBPHLA2RUH7 354 aa17.47■□□□□ 0.39
LAPTM4B-201ENST00000445593 F8W810 466 aa17.47■□□□□ 0.39
LAPTM4B-201ENST00000445593 SLC10A2Q12908 348 aaPredicted RBP17.47■□□□□ 0.39
LAPTM4B-201ENST00000445593 TNFAIP8L3Q5GJ75 292 aa17.47■□□□□ 0.39
LAPTM4B-201ENST00000445593 CTAGE3PQ8IX95 158 aa17.47■□□□□ 0.39
LAPTM4B-201ENST00000445593 USP6NLQ92738 828 aa17.47■□□□□ 0.39
LAPTM4B-201ENST00000445593 FAXDC2Q96IV6 333 aa17.47■□□□□ 0.39
LAPTM4B-201ENST00000445593 UBN1Q9NPG3 1134 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms