RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 ABCC9O60706 1549 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 M0R3H8 397 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 PSMD9O00233 223 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 PCDH17O14917 1159 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 ORC4O43929 436 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 TCEA3O75764 348 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 WDR47O94967 919 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 TNFRSF6BO95407 300 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 NTSR2O95665 410 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 CD19P15391 556 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 NDUFB7P17568 137 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 PBX1P40424 430 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 CLK3P49761 638 aaKnown RBP5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 MTHFSP49914 203 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 CCT8P50990 548 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 CACNA2D1P54289 1103 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 ICA1Q05084 483 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 DEUP1Q05D60 604 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 GRM1Q13255 1194 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 ELF2Q15723 593 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 GRHL2Q6ISB3 625 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 RASAL3Q86YV0 1011 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 CAGE1Q8TC20 777 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 FAM71BQ8TC56 605 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 TIMP4Q99727 224 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 FSCN3Q9NQT6 498 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 CCNL1Q9UK58 526 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 ADAM21Q9UKJ8 722 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 CA14Q9ULX7 337 aa5.3□□□□□ -1.56
HMGB3P6-201ENST00000444896 NACADO15069 1562 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 A8MVJ9 347 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 ZSCAN9O15535 394 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 SKAP2O75563 359 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 PDE8BO95263 885 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 FGAP02671 866 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 CSTBP04080 98 aaKnown RBP5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 ITGA5P08648 1049 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 DLDP09622 509 aaKnown RBP5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 SRGAP2BP0DMP2 458 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 NPPBP16860 134 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 DRD4P21917 467 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 YY1P25490 414 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 SERPINF1P36955 418 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 EEFSECP57772 596 aaKnown RBP5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 EIF4A1P60842 406 aaKnown RBP5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 GRAMD1BQ3KR37 738 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 TBC1D25Q3MII6 688 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 CCDC38Q502W7 563 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 RNASE12Q5GAN4 147 aaKnown RBP5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 AARS2Q5JTZ9 985 aaKnown RBP5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 PTCHD4Q6ZW05 846 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 FSTL5Q8N475 847 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 ATG16L2Q8NAA4 619 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 OR1N1Q8NGS0 311 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 ZG16BQ96DA0 208 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 BBC3Q96PG8 261 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 ZCWPW1Q9H0M4 648 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 PRDM13Q9H4Q3 707 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 EPS8L2Q9H6S3 715 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 ZNHIT2Q9UHR6 403 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 ADAMTS5Q9UNA0 930 aa5.29□□□□□ -1.56
HMGB3P6-201ENST00000444896 SCRIBQ14160 1630 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 GCOM1H8Y6P7 765 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 SYT5O00445 386 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 CES2O00748 559 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 KIAA0355O15063 1070 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 ASNA1O43681 348 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 GLP2RO95838 553 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 VIPP01282 170 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 ANXA6P08133 673 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 CREB1P16220 341 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 FPR3P25089 353 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 CHKAP35790 457 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 PTH2RP49190 550 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 BLMHQ13867 455 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 TRIM71Q2Q1W2 868 aaKnown RBP5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 AASDHQ4L235 1098 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 PCID2Q5JVF3 399 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 L1TD1Q5T7N2 865 aaKnown RBP5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 TSTD2Q5T7W7 516 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 MTHFD1LQ6UB35 978 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 GRASPQ7Z6J2 395 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 RASGRP3Q8IV61 690 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 CACNA2D3Q8IZS8 1091 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 SIRT6Q8N6T7 355 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 FAM98AQ8NCA5 519 aaKnown RBP5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 ABHD11Q8NFV4 315 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 GRAMD1AQ96CP6 724 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 EID2BQ96D98 161 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 PRR11Q96HE9 360 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 RMDN3Q96TC7 470 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 PRPF18Q99633 342 aaKnown RBP5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 MACROD1Q9BQ69 325 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 KRTAP4-2Q9BYR5 136 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 KLK15Q9H2R5 256 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 HELLSQ9NRZ9 838 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 SLC17A6Q9P2U8 582 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 C11orf21Q9P2W6 132 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 MGAT4CQ9UBM8 478 aa5.28□□□□□ -1.56
HMGB3P6-201ENST00000444896 TLK1Q9UKI8 766 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms