RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 PKDCCQ504Y2 493 aa19.8■□□□□ 0.76
ATPAF2-201ENST00000444058 LCLAT1Q6UWP7 414 aa19.8■□□□□ 0.76
ATPAF2-201ENST00000444058 SYT13Q7L8C5 426 aa19.8■□□□□ 0.76
ATPAF2-201ENST00000444058 BBS7Q8IWZ6 715 aa19.8■□□□□ 0.76
ATPAF2-201ENST00000444058 KCTD13Q8WZ19 329 aa19.8■□□□□ 0.76
ATPAF2-201ENST00000444058 C2orf42Q9NWW7 574 aa19.8■□□□□ 0.76
ATPAF2-201ENST00000444058 CNTN6Q9UQ52 1028 aa19.8■□□□□ 0.76
ATPAF2-201ENST00000444058 PCDHB4Q9Y5E5 795 aa19.8■□□□□ 0.76
ATPAF2-201ENST00000444058 HOXC11O43248 304 aaPredicted RBP19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 ZBED1O96006 694 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 TKTL1P51854 596 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 CNGA2Q16280 664 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 CT47A1Q5JQC4 288 aaPredicted RBP19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 C10orf120Q5SQS8 335 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 LY6G5CQ5SRR4 150 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 PKN3Q6P5Z2 889 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 SCML4Q8N228 414 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 ACDQ96AP0 544 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 CNOT6LQ96LI5 555 aaKnown RBP19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 FAM81BQ96LP2 452 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 PNKPQ96T60 521 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 NUP62CLQ9H1M0 184 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 LRRC4Q9HBW1 653 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 DACH1Q9UI36 760 aa19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 LSM7Q9UK45 103 aaKnown RBP19.79■□□□□ 0.76
ATPAF2-201ENST00000444058 SCAMP3O14828 347 aaKnown RBP19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 PRKCSHP14314 528 aaPredicted RBP19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 ERCC5P28715 1186 aaPredicted RBP19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 ZNF132P52740 706 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 COG7P83436 770 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 PREPLQ4J6C6 727 aaPredicted RBP19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 RRAGAQ7L523 313 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 ENOSF1Q7L5Y1 443 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 IRF2BP1Q8IU81 584 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 TFAP2BQ92481 460 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 KAT5Q92993 513 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 INTS2Q9H0H0 1204 aaKnown RBP19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 SPHK2Q9NRA0 654 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 LMBRD1Q9NUN5 540 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 SMG5Q9UPR3 1016 aaKnown RBP19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 SLC8A2Q9UPR5 921 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 GPR179Q6PRD1 2367 aa19.78■□□□□ 0.76
ATPAF2-201ENST00000444058 GTPBP10A4D1E9 387 aaKnown RBP19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 K7EQS6 105 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 RNF225M0QZC1 329 aaPredicted RBP19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 GRIA2P42262 883 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 FNTBP49356 437 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 YWHAGP61981 247 aaKnown RBP eCLIP19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 BTBD8Q5XKL5 378 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 WDR5BQ86VZ2 330 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 ARHGEF19Q8IW93 802 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 ETFBKMTQ8IXQ9 262 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 RBBP8NLQ8NC74 664 aaPredicted RBP19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 RPLP0P6Q8NHW5 317 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 USP33Q8TEY7 942 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 SLC35F5Q8WV83 523 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 SECISBP2LQ93073 1101 aaKnown RBP19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 WBP2Q969T9 261 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 GBP4Q96PP9 640 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 THAP9Q9H5L6 903 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 CNGB3Q9NQW8 809 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 MARK1Q9P0L2 795 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 ZNF510Q9Y2H8 683 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 MYO16Q9Y6X6 1858 aa19.77■□□□□ 0.76
ATPAF2-201ENST00000444058 TULP2O00295 520 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 KAT7O95251 611 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 APODP05090 189 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 IRF1P10914 325 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 SLC6A11P48066 632 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 MRPS21P82921 87 aaKnown RBP19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 DMWDQ09019 674 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 HSF5Q4G112 596 aaPredicted RBP19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 Q6ZNB5 142 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 FAM114A1Q8IWE2 563 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 UBA3Q8TBC4 463 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 KCNV2Q8TDN2 545 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 KREMEN1Q96MU8 473 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 IPO9Q96P70 1041 aaKnown RBP19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 ZSWIM1Q9BR11 485 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 ULBP1Q9BZM6 244 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 DCLK3Q9C098 648 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 OLA1Q9NTK5 396 aaKnown RBP19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 WDR35Q9P2L0 1181 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 NUDT5Q9UKK9 219 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 ZNF292O60281 2723 aa19.76■□□□□ 0.75
ATPAF2-201ENST00000444058 HRO43593 1189 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 STC2O76061 302 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 TNFRSF4P43489 277 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 ADIGQ0VDE8 80 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 MEA1Q16626 185 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 DPCR1Q3MIW9 517 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 TRIM65Q6PJ69 517 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 NUDT18Q6ZVK8 323 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 BHLHA9Q7RTU4 235 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 C12orf40Q86WS4 652 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 TMEM25Q86YD3 366 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 MIB1Q86YT6 1006 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 SIX6OS1Q8N1H7 587 aa19.75■□□□□ 0.75
ATPAF2-201ENST00000444058 PHTF2Q8N3S3 785 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms