RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 UBXN6Q9BZV1 441 aa17.22■□□□□ 0.35
CTDSP1-204ENST00000443891 FAM49BQ9NUQ9 324 aa17.22■□□□□ 0.35
CTDSP1-204ENST00000443891 HMGXB4Q9UGU5 601 aa17.22■□□□□ 0.35
CTDSP1-204ENST00000443891 ZNF510Q9Y2H8 683 aa17.22■□□□□ 0.35
CTDSP1-204ENST00000443891 HHLA1C9JL84 531 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 SGK1O00141 431 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 KHNYNO15037 678 aaKnown RBP17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 DCLK1O15075 740 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 ZNF202O95125 648 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 TIE1P35590 1138 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 P2RY2P41231 377 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 KIF11P52732 1056 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 PPP3CAQ08209 521 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 TMEM92Q6UXU6 159 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 TAS1R2Q8TE23 839 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 DUSP16Q9BY84 665 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 TPSD1Q9BZJ3 242 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 APOBEC3GQ9HC16 384 aaKnown RBP17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 RMND1Q9NWS8 449 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 CLIC5Q9NZA1 410 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 EVLQ9UI08 416 aaPredicted RBP17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 DNMT3LQ9UJW3 386 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 USP3Q9Y6I4 520 aa17.21■□□□□ 0.35
CTDSP1-204ENST00000443891 ATG2BQ96BY7 2078 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 CETN3O15182 167 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 ZBTB24O43167 697 aaPredicted RBP17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 CACNG3O60359 315 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 GREM1O60565 184 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 RALAP11233 206 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 ACO1P21399 889 aaKnown RBP17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 ADORA2BP29275 332 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 HOXD12P35452 270 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 E2F5Q15329 346 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 CCDC6Q16204 474 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 ANO4Q32M45 955 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 COBLL1Q53SF7 1204 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 DAB2IPQ5VWQ8 1189 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 GRAMD4Q6IC98 578 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 LPCAT2Q7L5N7 544 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 CYP2U1Q7Z449 544 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 TMEM25Q86YD3 366 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 ZNF513Q8N8E2 541 aaPredicted RBP17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 FBXL13Q8NEE6 735 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 EDEM2Q9BV94 578 aa17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 BCCIPQ9P287 314 aaKnown RBP eCLIP17.2■□□□□ 0.34
CTDSP1-204ENST00000443891 EML5Q05BV3 1969 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 MYO16Q9Y6X6 1858 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 SCAMP3O14828 347 aaKnown RBP17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 ADAM23O75077 832 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 TRIM49P0CI25 452 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 TRIM49CP0CI26 452 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 EPB41P11171 864 aaKnown RBP17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 RARGP13631 454 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 NTSR1P30989 418 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 SLC8A3P57103 927 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 COG7P83436 770 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 KDSRQ06136 332 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 MESP2Q0VG99 397 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 ORC1Q13415 861 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 SDE2Q6IQ49 451 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 SLC36A4Q6YBV0 504 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 ARHGAP18Q8N392 663 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 ELMO3Q96BJ8 720 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 CNTNAP3BQ96NU0 1288 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 TWNKQ96RR1 684 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 CNTNAP3Q9BZ76 1288 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 DCLK3Q9C098 648 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 RXFP3Q9NSD7 469 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 RAB20Q9NX57 234 aa17.19■□□□□ 0.34
CTDSP1-204ENST00000443891 GFRA2O00451 464 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 NPC1O15118 1278 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 MAP3K13O43283 966 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 ZNF217O75362 1048 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 TBX18O95935 607 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 IRF1P10914 325 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 HNRNPLP14866 589 aaKnown RBP eCLIP17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 CHKAP35790 457 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 MXI1P50539 228 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 SHC2P98077 582 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 LMAN2Q12907 356 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 C10orf76Q5T2E6 689 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 EMC10Q5UCC4 262 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 GPRIN1Q7Z2K8 1008 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 NAT16Q8N8M0 369 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 GSDMAQ96QA5 445 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 BBS2Q9BXC9 721 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 DNAJC17Q9NVM6 304 aaKnown RBP17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 SPTBN2O15020 2390 aa17.18■□□□□ 0.34
CTDSP1-204ENST00000443891 SDK1Q7Z5N4 2213 aa17.17■□□□□ 0.34
CTDSP1-204ENST00000443891 A0A1W2PQH9 124 aa17.17■□□□□ 0.34
CTDSP1-204ENST00000443891 TCRBV21S2A2A0A5A6 115 aa17.17■□□□□ 0.34
CTDSP1-204ENST00000443891 LNP1A1A4G5 178 aa17.17■□□□□ 0.34
CTDSP1-204ENST00000443891 SLC16A3O15427 465 aaKnown RBP17.17■□□□□ 0.34
CTDSP1-204ENST00000443891 CYP26A1O43174 497 aa17.17■□□□□ 0.34
CTDSP1-204ENST00000443891 AP5Z1O43299 807 aa17.17■□□□□ 0.34
CTDSP1-204ENST00000443891 KCNK5O95279 499 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms