RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 NMUR1Q9HB89 426 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 ACP6Q9NPH0 428 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 TBC1D14Q9P2M4 693 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 STRIP2Q9ULQ0 834 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 CA14Q9ULX7 337 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 SH3BP1Q9Y3L3 701 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 COL4A2P08572 1712 aa11.37□□□□□ -0.59
HDAC6-211ENST00000443563 E2F8A0AVK6 867 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 STK25O00506 426 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 MAN2B1O00754 1011 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 EPHB6O15197 1021 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 LSM8O95777 96 aaKnown RBP11.36□□□□□ -0.59
HDAC6-211ENST00000443563 LTFP02788 710 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 FERP16591 822 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 COG7P83436 770 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 NR1H3Q13133 447 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 PDCLQ13371 301 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 ITPRIPL2Q3MIP1 535 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 FIGNQ5HY92 759 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 BSPRYQ5W0U4 402 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 TRIM72Q6ZMU5 477 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 SCD5Q86SK9 330 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 TMEM110Q86TL2 294 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 PASD1Q8IV76 773 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 CPA6Q8N4T0 437 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 TTC16Q8NEE8 873 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 ZNF397Q8NF99 534 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-211ENST00000443563 EPS8L1Q8TE68 723 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 IPO4Q8TEX9 1081 aaKnown RBP11.36□□□□□ -0.59
HDAC6-211ENST00000443563 OTUB2Q96DC9 234 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 PPP1R13BQ96KQ4 1090 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 LRRC3BQ96PB8 259 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 FAM83CQ9BQN1 747 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 SYNCQ9H7C4 482 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 GKN1Q9NS71 199 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 OSER1Q9NX31 292 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 DUS2Q9NX74 493 aaKnown RBP11.36□□□□□ -0.59
HDAC6-211ENST00000443563 SMPD4Q9NXE4 827 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 IFNKQ9P0W0 207 aa11.36□□□□□ -0.59
HDAC6-211ENST00000443563 LSM7Q9UK45 103 aaKnown RBP11.36□□□□□ -0.59
HDAC6-211ENST00000443563 MRPS17Q9Y2R5 130 aaKnown RBP11.36□□□□□ -0.59
HDAC6-211ENST00000443563 FAM86C2PA6NEL3 165 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 YJEFN3A6XGL0 299 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 E5RJQ4 531 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 E7ENQ6 273 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 ARNTLO00327 626 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 NFATC1O95644 943 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 CDH5P33151 784 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-211ENST00000443563 PGFP49763 221 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 KPNA1P52294 538 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-211ENST00000443563 STARD6P59095 220 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 CDR2Q01850 454 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 RUNX3Q13761 415 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 TAF3Q5VWG9 929 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 ZNF852Q6ZMS4 543 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 TPRG1Q6ZUI0 275 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 BEND5Q7L4P6 421 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 BHLHA9Q7RTU4 235 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 NOP9Q86U38 636 aaKnown RBP11.35□□□□□ -0.59
HDAC6-211ENST00000443563 ZDHHC17Q8IUH5 632 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 SCUBE3Q8IX30 993 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 FBXL6Q8N531 539 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 DDX1Q92499 740 aaKnown RBP11.35□□□□□ -0.59
HDAC6-211ENST00000443563 ZFRQ96KR1 1074 aaKnown RBP11.35□□□□□ -0.59
HDAC6-211ENST00000443563 NELL2Q99435 816 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 KLF16Q9BXK1 252 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-211ENST00000443563 DCLK3Q9C098 648 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 NUCKS1Q9H1E3 243 aaKnown RBP11.35□□□□□ -0.59
HDAC6-211ENST00000443563 HEBP1Q9NRV9 189 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 CFAP97Q9P2B7 532 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 RASAL2Q9UJF2 1139 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 ZNF510Q9Y2H8 683 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 PIAS3Q9Y6X2 628 aa11.35□□□□□ -0.59
HDAC6-211ENST00000443563 A0A1W2PQJ5 194 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 KANSL1LA0AUZ9 987 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 KRBA1A5PL33 1030 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 PIK3R2O00459 728 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 CAPN9O14815 690 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 NCAM2O15394 837 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 TBX18O95935 607 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 GLI1P08151 1106 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 MMEP08473 750 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 CLCN5P51795 746 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 ZXDBP98169 803 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 ARID5AQ03989 594 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 EFEMP1Q12805 493 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 EML3Q32P44 896 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 EFHC1Q5JVL4 640 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 ASTLQ6HA08 431 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-211ENST00000443563 PPP1R2P3Q6NXS1 205 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 TOGARAM2Q6ZUX3 1019 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 HFE2Q6ZVN8 426 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 HTR3DQ70Z44 454 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 RALGPS2Q86X27 583 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-211ENST00000443563 ERICH1Q86X53 443 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 MIB1Q86YT6 1006 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 WDTC1Q8N5D0 677 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 RNF214Q8ND24 703 aa11.34□□□□□ -0.59
HDAC6-211ENST00000443563 C1orf131Q8NDD1 294 aaKnown RBP11.34□□□□□ -0.59
HDAC6-211ENST00000443563 FLCNQ8NFG4 579 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms