RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 GTPBP2Q9BX10 602 aaKnown RBP12.61□□□□□ -0.39
TNXB-202ENST00000442721 LRRC27Q9C0I9 530 aa12.61□□□□□ -0.39
TNXB-202ENST00000442721 DMAP1Q9NPF5 467 aaPredicted RBP12.61□□□□□ -0.39
TNXB-202ENST00000442721 DNAAF2Q9NVR5 837 aaKnown RBP12.61□□□□□ -0.39
TNXB-202ENST00000442721 GMIPQ9P107 970 aa12.61□□□□□ -0.39
TNXB-202ENST00000442721 NXF1Q9UBU9 619 aaKnown RBP12.61□□□□□ -0.39
TNXB-202ENST00000442721 ATP8B3O60423 1300 aa12.61□□□□□ -0.39
TNXB-202ENST00000442721 TAF4O00268 1085 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 CACNG3O60359 315 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 ZNF217O75362 1048 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 NDUFV2P19404 249 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 SYT1P21579 422 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 NASPP49321 788 aaPredicted RBP12.6□□□□□ -0.39
TNXB-202ENST00000442721 PGFP49763 221 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 CYP2J2P51589 502 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 ATXN3P54252 364 aaPredicted RBP12.6□□□□□ -0.39
TNXB-202ENST00000442721 CDH8P55286 799 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 TRPC3Q13507 836 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 HNRNPDQ14103 355 aaKnown RBP12.6□□□□□ -0.39
TNXB-202ENST00000442721 ZNF423Q2M1K9 1284 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 ANO4Q32M45 955 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 FAM26FQ5R3K3 315 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 GRAMD4Q6IC98 578 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 HTR3DQ70Z44 454 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 RAB44Q7Z6P3 723 aaPredicted RBP12.6□□□□□ -0.39
TNXB-202ENST00000442721 C12orf56Q8IXR9 622 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 XXYLT1Q8NBI6 393 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 ZMIZ2Q8NF64 920 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 OR2I1PQ8NGU4 316 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 PLEKHO2Q8TD55 490 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 SYAP1Q96A49 352 aaPredicted RBP12.6□□□□□ -0.39
TNXB-202ENST00000442721 SMARCD1Q96GM5 515 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 ACOX2Q99424 681 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 GABRG3Q99928 467 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 KLF16Q9BXK1 252 aaPredicted RBP12.6□□□□□ -0.39
TNXB-202ENST00000442721 CUEDC2Q9H467 287 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 MARK1Q9P0L2 795 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
TNXB-202ENST00000442721 ANKRD11Q6UB99 2663 aaPredicted RBP12.6□□□□□ -0.39
TNXB-202ENST00000442721 LAMA5O15230 3695 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 CLIC2O15247 247 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 TLR5O60602 858 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 WASP42768 502 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 ASIC1P78348 528 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 SLC14A1Q13336 389 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 FUKQ8N0W3 1084 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 CHCHD4Q8N4Q1 142 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 TRIML1Q8N9V2 468 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 LINC00301Q8NCQ3 95 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 IPO4Q8TEX9 1081 aaKnown RBP12.59□□□□□ -0.39
TNXB-202ENST00000442721 SCFD1Q8WVM8 642 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 ZNF419Q96HQ0 510 aaPredicted RBP12.59□□□□□ -0.39
TNXB-202ENST00000442721 TNIP3Q96KP6 325 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 HSPA12BQ96MM6 686 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 SMOQ99835 787 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 C7orf25Q9BPX7 421 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 MED10Q9BTT4 135 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 SDCBP2Q9H190 292 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 CSNK1G1Q9HCP0 422 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 DNAJC17Q9NVM6 304 aaKnown RBP12.59□□□□□ -0.39
TNXB-202ENST00000442721 CYP8B1Q9UNU6 501 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 MTMR6Q9Y217 621 aa12.59□□□□□ -0.39
TNXB-202ENST00000442721 MYH10P35580 1976 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 PRRT4C9JH25 899 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 AP1G2O75843 785 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 SYPP08247 313 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 CISD3P0C7P0 127 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 IRF1P10914 325 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 TYRP14679 529 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 RDXP35241 583 aaKnown RBP12.58□□□□□ -0.4
TNXB-202ENST00000442721 CLDN10P78369 228 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 BMT2Q1RMZ1 405 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 ZNF699Q32M78 642 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 TOGARAM2Q6ZUX3 1019 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 PROSER1Q86XN7 944 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 NELFCDQ8IXH7 590 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 CHPFQ8IZ52 775 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 MRGPRX1Q96LB2 322 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 BBS2Q9BXC9 721 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 CD93Q9NPY3 652 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 CYLDQ9NQC7 956 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 KRT82Q9NSB4 513 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 WDR35Q9P2L0 1181 aa12.58□□□□□ -0.4
TNXB-202ENST00000442721 CGNQ9P2M7 1197 aaKnown RBP12.58□□□□□ -0.4
TNXB-202ENST00000442721 NBEAQ8NFP9 2946 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 NEDD8-MDP1E9PL57 170 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 GFRA2O00451 464 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 SH3BP5O60239 455 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 BEST1O76090 585 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 VNN1O95497 513 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 TBX18O95935 607 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 C4BPAP04003 597 aaKnown RBP12.57□□□□□ -0.4
TNXB-202ENST00000442721 CCDC130P13994 396 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 CASP4P49662 377 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 AMPD3Q01432 767 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 NCOA4Q13772 614 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 ZNF667Q5HYK9 610 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 SCARA5Q6ZMJ2 495 aa12.57□□□□□ -0.4
TNXB-202ENST00000442721 UNC13DQ70J99 1090 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms