RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ZNF677Q86XU0 584 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 FMNL3Q8IVF7 1028 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 OTUB2Q96DC9 234 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 ZFYVE19Q96K21 471 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 NOX5Q96PH1 765 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 KLF16Q9BXK1 252 aaPredicted RBP15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 OSBPL6Q9BZF3 934 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 TBC1D17Q9HA65 648 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 NLRC4Q9NPP4 1024 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 ABCC13Q9NSE7 274 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 TBC1D14Q9P2M4 693 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 MYO6Q9UM54 1294 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 MRPS17Q9Y2R5 130 aaKnown RBP15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 CEP83Q9Y592 693 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 ZNF318Q5VUA4 2279 aa15.78■□□□□ 0.12
CSNK1E-210ENST00000442216 MYOFQ9NZM1 2061 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 KANSL1LA0AUZ9 987 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 PDGFBP01127 241 aaPredicted RBP15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 CDH5P33151 784 aaPredicted RBP15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 IFNAR2P48551 515 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 NUBP1P53384 320 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 FANCCQ00597 558 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 RUNX3Q13761 415 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 C10orf120Q5SQS8 335 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 IER5LQ5T953 404 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 BTBD8Q5XKL5 378 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 CWF19L1Q69YN2 538 aaKnown RBP15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 ASTLQ6HA08 431 aaPredicted RBP15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 ZNF852Q6ZMS4 543 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 TPRG1Q6ZUI0 275 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 RALGPS2Q86X27 583 aaPredicted RBP15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 DDX1Q92499 740 aaKnown RBP15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 ATP2A3Q93084 1043 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 NAP1L5Q96NT1 182 aaPredicted RBP15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 TRIM62Q9BVG3 475 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 HPS4Q9NQG7 708 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 ST7Q9NRC1 585 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 DUS2Q9NX74 493 aaKnown RBP15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 SMPD4Q9NXE4 827 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 PIAS3Q9Y6X2 628 aa15.77■□□□□ 0.12
CSNK1E-210ENST00000442216 F5P12259 2224 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 YJEFN3A6XGL0 299 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 E7ENQ6 273 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 TBX18O95935 607 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 CCDC172P0C7W6 258 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 AOC1P19801 751 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 ZNF445P59923 1031 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 COG7P83436 770 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 AMPD2Q01433 879 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 PDCLQ13371 301 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 EML3Q32P44 896 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 BSPRYQ5W0U4 402 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 HTR3DQ70Z44 454 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 BEND5Q7L4P6 421 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 CACNA2D4Q7Z3S7 1137 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 CPA6Q8N4T0 437 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 WDTC1Q8N5D0 677 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 EPS8L1Q8TE68 723 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 GOLGA1Q92805 767 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 EDEM3Q9BZQ6 932 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 EBF3Q9H4W6 596 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 GTSE1Q9NYZ3 720 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 CFAP97Q9P2B7 532 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 CYTH4Q9UIA0 394 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 SH3BP1Q9Y3L3 701 aa15.76■□□□□ 0.11
CSNK1E-210ENST00000442216 GFPT2O94808 682 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 NFATC1O95644 943 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 LSM8O95777 96 aaKnown RBP15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 LTFP02788 710 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 AVPR2P30518 371 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 KPNA1P52294 538 aaPredicted RBP15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 UBASH3AP57075 661 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 TNK2Q07912 1038 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 NR1H3Q13133 447 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 FIGNQ5HY92 759 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 RSRC2Q7L4I2 434 aaKnown RBP15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 NOP9Q86U38 636 aaKnown RBP15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 TMEM35BQ8NCS4 154 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 FLCNQ8NFG4 579 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 RNF139Q8WU17 664 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 PPP1R13BQ96KQ4 1090 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 PDCL3Q9H2J4 239 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 ECT2Q9H8V3 914 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 LTB4R2Q9NPC1 389 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 LSM7Q9UK45 103 aaKnown RBP15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 STRIP2Q9ULQ0 834 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 ZNF510Q9Y2H8 683 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 WNT6Q9Y6F9 365 aa15.75■□□□□ 0.11
CSNK1E-210ENST00000442216 COL4A3Q01955 1670 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 ZDBF2Q9HCK1 2354 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 SHISA7A6NL88 538 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 E5RJQ4 531 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 SPECC1L-ADORA2AF8WAN1 911 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 STK25O00506 426 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 NCAM2O15394 837 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 PAPSS1O43252 624 aaPredicted RBP15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 GLI1P08151 1106 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 CTHP32929 405 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 MAGEA9P43362 315 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 CDR2Q01850 454 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms