RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 SACM1LQ9NTJ5 587 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 KCNK4Q9NYG8 393 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 WRAP73Q9P2S5 460 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 HBS1LQ9Y450 684 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 TRPM3Q9HCF6 1732 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 PARP4Q9UKK3 1724 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 RGPD5Q99666 1765 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 A6NL46 340 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 K7EPI3 171 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 P4HA2O15460 535 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CST8O60676 142 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 THRAP10827 490 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 P4HA1P13674 534 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 ADSSP30520 456 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 DSG3P32926 999 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 RFC1P35251 1148 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 SCNN1DP51172 638 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 SP4Q02446 784 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 SULT2A1Q06520 285 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 ORC2Q13416 577 aaPredicted RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 FLOT2Q14254 428 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 DCAF6Q58WW2 860 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 PPM1LQ5SGD2 360 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 PERM1Q5SV97 790 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CYP4A22Q5TCH4 519 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 FOXR2Q6PJQ5 311 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 TMEM270Q6UE05 265 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 WDR75Q8IWA0 830 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CPT1BQ92523 772 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 SLCO2A1Q92959 643 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 PPWD1Q96BP3 646 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 DCPSQ96C86 337 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 TMA16Q96EY4 203 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 PPP1R10Q96QC0 940 aaKnown RBP7.8□□□□□ -1.16
HDAC9-214ENST00000441542 HEPHQ9BQS7 1158 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CALN1Q9BXU9 219 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 TRPV6Q9H1D0 765 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 RNPEPQ9H4A4 650 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 GPAMQ9HCL2 828 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 FAIMQ9NVQ4 179 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 CNTNAP2Q9UHC6 1331 aa7.8□□□□□ -1.16
HDAC9-214ENST00000441542 KCPQ6ZWJ8 1503 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 ERVV-1B6SEH8 477 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 ADAM23O75077 832 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 PTPN1P18031 435 aaKnown RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 NR4A1P22736 598 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 RPL22P35268 128 aaKnown RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 HADHBP55084 474 aaKnown RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 SPIRE1Q08AE8 756 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 ITGADQ13349 1161 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 MORF4L2Q15014 288 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 PLEKHA7Q6IQ23 1121 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 TATDN1Q6P1N9 297 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 CASC4Q6P4E1 433 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 SLC2A7Q6PXP3 512 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 ADGRD1Q6QNK2 874 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 C16orf86Q6ZW13 317 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 MIER3Q7Z3K6 550 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 RFX6Q8HWS3 928 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 UNC45BQ8IWX7 931 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 ALLCQ8N6M5 410 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 NAT16Q8N8M0 369 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 HSPH1Q92598 858 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 CDRT15Q96T59 188 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 CCDC106Q9BWC9 280 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 MRPS26Q9BYN8 205 aaKnown RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 ACSS3Q9H6R3 686 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 C17orf75Q9HAS0 396 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 TBC1D23Q9NUY8 699 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 CDC14AQ9UNH5 594 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 FIS1Q9Y3D6 152 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 PCDHB4Q9Y5E5 795 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 ABCA3Q99758 1704 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 TNS1Q9HBL0 1735 aaKnown RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 TPST1O60507 370 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 OXSR1O95747 527 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 AMHP03971 560 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 PSMC3P17980 439 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 EIF2AK2P19525 551 aaKnown RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 ITGAXP20702 1163 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 ABCG1P45844 678 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 FSTL1Q12841 308 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 BNIP3Q12983 259 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 KLF1Q13351 362 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 SNAPC2Q13487 334 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 HNRNPDQ14103 355 aaKnown RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 EGFLAMQ63HQ2 1017 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 PDPK2PQ6A1A2 396 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 NPNTQ6UXI9 565 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 C1orf186Q6ZWK4 172 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 TDRPQ86YL5 185 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 SNX29P2Q8IUI4 249 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 ZNF786Q8N393 782 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 TTLL6Q8N841 843 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 BHLHE22Q8NFJ8 381 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 DQX1Q8TE96 717 aaKnown RBP7.79□□□□□ -1.16
HDAC9-214ENST00000441542 NLRP7Q8WX94 980 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 PKP2Q99959 881 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 TMEM79Q9BSE2 394 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms