RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TMEM105Q8N8V8 129 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 C1orf131Q8NDD1 294 aaKnown RBP18.93■□□□□ 0.62
CPSF4-205ENST00000440514 OSCP1Q8WVF1 389 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 SHDQ96IW2 340 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 HSFY1Q96LI6 401 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 NAP1L5Q96NT1 182 aaPredicted RBP18.93■□□□□ 0.62
CPSF4-205ENST00000440514 SPAG5Q96R06 1193 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 DDX23Q9BUQ8 820 aaKnown RBP18.93■□□□□ 0.62
CPSF4-205ENST00000440514 KLF16Q9BXK1 252 aaPredicted RBP18.93■□□□□ 0.62
CPSF4-205ENST00000440514 TSPY26PQ9H489 355 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 CNGB3Q9NQW8 809 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 TJP2Q9UDY2 1190 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 RASAL2Q9UJF2 1139 aa18.93■□□□□ 0.62
CPSF4-205ENST00000440514 FAM170AA1A519 330 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 OTOL1A6NHN0 477 aaPredicted RBP18.92■□□□□ 0.62
CPSF4-205ENST00000440514 CYP11B1P15538 503 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 AOC1P19801 751 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 BPIFB4P59827 614 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 PDGFRLQ15198 375 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 ITPRIPL2Q3MIP1 535 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 ASTLQ6HA08 431 aaPredicted RBP18.92■□□□□ 0.62
CPSF4-205ENST00000440514 LRSAM1Q6UWE0 723 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 RSRC2Q7L4I2 434 aaKnown RBP18.92■□□□□ 0.62
CPSF4-205ENST00000440514 NOP9Q86U38 636 aaKnown RBP18.92■□□□□ 0.62
CPSF4-205ENST00000440514 MIB1Q86YT6 1006 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 SCML4Q8N228 414 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 WDTC1Q8N5D0 677 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 EPS8L1Q8TE68 723 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 EDEM1Q92611 657 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 SLC4A5Q9BY07 1137 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 LINC00597Q9H2U6 94 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 MTF2Q9Y483 593 aaPredicted RBP18.92■□□□□ 0.62
CPSF4-205ENST00000440514 DAAM1Q9Y4D1 1078 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 ZDBF2Q9HCK1 2354 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 MIA3Q5JRA6 1907 aa18.92■□□□□ 0.62
CPSF4-205ENST00000440514 KANSL1LA0AUZ9 987 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 E5RJQ4 531 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 SPECC1L-ADORA2AF8WAN1 911 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 PI15O43692 258 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 KRT9P35527 623 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 SOX5P35711 763 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 RPL34P49207 117 aaKnown RBP18.91■□□□□ 0.62
CPSF4-205ENST00000440514 FANCCQ00597 558 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 EFEMP1Q12805 493 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 RUNX3Q13761 415 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 UBXN2BQ14CS0 331 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 EML3Q32P44 896 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 BSPRYQ5W0U4 402 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 BTBD8Q5XKL5 378 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 KLHDC10Q6PID8 442 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 TADA2BQ86TJ2 420 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 PJA1Q8NG27 643 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 STK32AQ8WU08 396 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 SLC20A1Q8WUM9 679 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 LTB4R2Q9NPC1 389 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 DNMT3LQ9UJW3 386 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 SH3BP1Q9Y3L3 701 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 ZNF318Q5VUA4 2279 aa18.91■□□□□ 0.62
CPSF4-205ENST00000440514 E2F8A0AVK6 867 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 FBXO21O94952 628 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 TARSP26639 723 aaKnown RBP18.9■□□□□ 0.62
CPSF4-205ENST00000440514 AVPR2P30518 371 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 CTHP32929 405 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 STAT1P42224 750 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 ACADSBP45954 432 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 TXNDC11Q6PKC3 985 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 CCDC105Q8IYK2 499 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 CPA6Q8N4T0 437 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 ZNF276Q8N554 614 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 IRGQQ8WZA9 623 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 DDX1Q92499 740 aaKnown RBP18.9■□□□□ 0.62
CPSF4-205ENST00000440514 ATP2A3Q93084 1043 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 CPXM1Q96SM3 734 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 CDK5RAP1Q96SZ6 601 aaKnown RBP18.9■□□□□ 0.62
CPSF4-205ENST00000440514 LHX5Q9H2C1 402 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 PDCL3Q9H2J4 239 aa18.9■□□□□ 0.62
CPSF4-205ENST00000440514 NOCTQ9UK39 431 aaKnown RBP18.9■□□□□ 0.62
CPSF4-205ENST00000440514 NDRG2Q9UN36 371 aaKnown RBP18.9■□□□□ 0.62
CPSF4-205ENST00000440514 PAPSS1O43252 624 aaPredicted RBP18.89■□□□□ 0.61
CPSF4-205ENST00000440514 LTFP02788 710 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 DCNP07585 359 aaKnown RBP18.89■□□□□ 0.61
CPSF4-205ENST00000440514 HMBSP08397 361 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 CLCN5P51795 746 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 NAIF1Q69YI7 327 aaPredicted RBP18.89■□□□□ 0.61
CPSF4-205ENST00000440514 ZNF852Q6ZMS4 543 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 CACNA2D4Q7Z3S7 1137 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 BBS7Q8IWZ6 715 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 SCUBE3Q8IX30 993 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 FAM3CQ92520 227 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 CHFRQ96EP1 664 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 PIWIL1Q96J94 861 aaKnown RBP18.89■□□□□ 0.61
CPSF4-205ENST00000440514 C8orf33Q9H7E9 229 aaPredicted RBP18.89■□□□□ 0.61
CPSF4-205ENST00000440514 ECT2Q9H8V3 914 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 MARCH2Q9P0N8 246 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 RAPGEFL1Q9UHV5 662 aa18.89■□□□□ 0.61
CPSF4-205ENST00000440514 A0A1W2PQC6 194 aa18.88■□□□□ 0.61
CPSF4-205ENST00000440514 MAN2B1O00754 1011 aa18.88■□□□□ 0.61
CPSF4-205ENST00000440514 GREM1O60565 184 aa18.88■□□□□ 0.61
CPSF4-205ENST00000440514 NFATC1O95644 943 aa18.88■□□□□ 0.61
CPSF4-205ENST00000440514 ERBB2P04626 1255 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms