RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 SLITRK1Q96PX8 696 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 PLEKHA4Q9H4M7 779 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 ABCC13Q9NSE7 274 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 STAP1Q9ULZ2 295 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 A0A1W2PQH9 124 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 RNF8O76064 485 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 LRG1P02750 347 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 RPS6KA1Q15418 735 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 SLC25A52Q3SY17 297 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 SH3PXD2AQ5TCZ1 1133 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 BTBD8Q5XKL5 378 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 RTL10Q7L3V2 364 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 DNAJB7Q7Z6W7 309 aaPredicted RBP24.36■■□□□ 1.49
LONRF3-204ENST00000439603 CD101Q93033 1021 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 NT5C3BQ969T7 300 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 PSMG2Q969U7 264 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 HES6Q96HZ4 224 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 MYRFLQ96LU7 910 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 NMUR1Q9HB89 426 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 ASB3Q9Y575 518 aa24.36■■□□□ 1.49
LONRF3-204ENST00000439603 CDO1Q16878 200 aa24.35■■□□□ 1.49
LONRF3-204ENST00000439603 ITIH5Q86UX2 942 aa24.35■■□□□ 1.49
LONRF3-204ENST00000439603 ARFGAP1Q8N6T3 406 aa24.35■■□□□ 1.49
LONRF3-204ENST00000439603 TRMT2BQ96GJ1 504 aaKnown RBP24.35■■□□□ 1.49
LONRF3-204ENST00000439603 ZNF576Q9H609 170 aa24.35■■□□□ 1.49
LONRF3-204ENST00000439603 TLE6Q9H808 572 aa24.35■■□□□ 1.49
LONRF3-204ENST00000439603 MAN1C1Q9NR34 630 aa24.35■■□□□ 1.49
LONRF3-204ENST00000439603 TLR8Q9NR97 1041 aaKnown RBP24.35■■□□□ 1.49
LONRF3-204ENST00000439603 MYO7AQ13402 2215 aa24.35■■□□□ 1.49
LONRF3-204ENST00000439603 MIF4GDA9UHW6 222 aaKnown RBP24.34■■□□□ 1.49
LONRF3-204ENST00000439603 LRCH4O75427 683 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 EPCAMP16422 314 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 TFE3P19532 575 aaPredicted RBP24.34■■□□□ 1.49
LONRF3-204ENST00000439603 PSEN1P49768 467 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 PAPD7Q5XG87 772 aaKnown RBP24.34■■□□□ 1.49
LONRF3-204ENST00000439603 FAM172AQ8WUF8 416 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 CENPIQ92674 756 aaPredicted RBP24.34■■□□□ 1.49
LONRF3-204ENST00000439603 MRPL38Q96DV4 380 aaKnown RBP24.34■■□□□ 1.49
LONRF3-204ENST00000439603 NPY6RQ99463 290 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 RRN3Q9NYV6 651 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 COLQQ9Y215 455 aaPredicted RBP24.34■■□□□ 1.49
LONRF3-204ENST00000439603 SSR1P43307 286 aaKnown RBP24.34■■□□□ 1.49
LONRF3-204ENST00000439603 SULT1E1P49888 294 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 PPM1LQ5SGD2 360 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 HDAC7Q8WUI4 952 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 OVCA2Q8WZ82 227 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 TBCBQ99426 244 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 OSER1Q9NX31 292 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 HCFC2Q9Y5Z7 792 aa24.34■■□□□ 1.49
LONRF3-204ENST00000439603 ZNF638Q14966 1978 aaKnown RBP24.33■■□□□ 1.49
LONRF3-204ENST00000439603 MYO16Q9Y6X6 1858 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 ZDHHC11BP0C7U3 371 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 DNA2P51530 1060 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 TAS2R40P59535 323 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 STRADAQ7RTN6 431 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 PDZD8Q8NEN9 1154 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 ADAM33Q9BZ11 813 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 CLIC5Q9NZA1 410 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 DPP7Q9UHL4 492 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 SNX12Q9UMY4 172 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 CDH23Q9H251 3354 aa24.33■■□□□ 1.49
LONRF3-204ENST00000439603 CCDC66A2RUB6 948 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 CTNNA2P26232 953 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 CTNNA1P35221 906 aaKnown RBP24.32■■□□□ 1.48
LONRF3-204ENST00000439603 PCK1P35558 622 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 PITX1P78337 314 aaPredicted RBP24.32■■□□□ 1.48
LONRF3-204ENST00000439603 DUSP6Q16828 381 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 RHOT1Q8IXI2 618 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 UBL4BQ8N7F7 174 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 KRT35Q92764 455 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 ZNF512Q96ME7 567 aaPredicted RBP24.32■■□□□ 1.48
LONRF3-204ENST00000439603 NCAPGQ9BPX3 1015 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 UXTQ9UBK9 157 aaPredicted RBP24.32■■□□□ 1.48
LONRF3-204ENST00000439603 PCDHA3Q9Y5H8 950 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 MTCL1Q9Y4B5 1905 aaKnown RBP24.32■■□□□ 1.48
LONRF3-204ENST00000439603 M0QYT0 321 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 DDX3YO15523 660 aaKnown RBP24.32■■□□□ 1.48
LONRF3-204ENST00000439603 ZMYND10O75800 440 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 TCF4P15884 667 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 MIPP30301 263 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 NRIP1P48552 1158 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 HDAC4P56524 1084 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 RAB6CQ53S08 254 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 BNIPLQ7Z465 357 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 ELMOD1Q8N336 334 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 RNF139Q8WU17 664 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 RAB6CQ9H0N0 254 aa24.32■■□□□ 1.48
LONRF3-204ENST00000439603 COL4A4P53420 1690 aaPredicted RBP24.31■■□□□ 1.48
LONRF3-204ENST00000439603 ENDOD1O94919 500 aa24.31■■□□□ 1.48
LONRF3-204ENST00000439603 RALAP11233 206 aa24.31■■□□□ 1.48
LONRF3-204ENST00000439603 HADHQ16836 314 aaKnown RBP24.31■■□□□ 1.48
LONRF3-204ENST00000439603 OTUD1Q5VV17 481 aaPredicted RBP24.31■■□□□ 1.48
LONRF3-204ENST00000439603 PSMB7Q99436 277 aa24.31■■□□□ 1.48
LONRF3-204ENST00000439603 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.31■■□□□ 1.48
LONRF3-204ENST00000439603 CALCOCO1Q9P1Z2 691 aa24.31■■□□□ 1.48
LONRF3-204ENST00000439603 USP18Q9UMW8 372 aa24.31■■□□□ 1.48
LONRF3-204ENST00000439603 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.31■■□□□ 1.48
LONRF3-204ENST00000439603 SAR1BQ9Y6B6 198 aa24.31■■□□□ 1.48
LONRF3-204ENST00000439603 PSTPIP1O43586 416 aa24.3■■□□□ 1.48
LONRF3-204ENST00000439603 URI1O94763 535 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms