RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 FAM86C1Q9NVL1 165 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 WDR3Q9UNX4 943 aaKnown RBP eCLIP11□□□□□ -0.65
MCF2L-216ENST00000439475 CNTN6Q9UQ52 1028 aa11□□□□□ -0.65
MCF2L-216ENST00000439475 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.99□□□□□ -0.65
MCF2L-216ENST00000439475 M0QYV0 167 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 IRF1P10914 325 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 LCP1P13796 627 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 PTMSP20962 102 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 CDK11BP21127 795 aaKnown RBP10.99□□□□□ -0.65
MCF2L-216ENST00000439475 BRD2P25440 801 aaKnown RBP10.99□□□□□ -0.65
MCF2L-216ENST00000439475 PON1P27169 355 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 GNA15P30679 374 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 NBL1P41271 181 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 ACADSBP45954 432 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 BPIFB4P59827 614 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 PTK2Q05397 1052 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 MTAPQ13126 283 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 HSP90AA4PQ58FG1 418 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 TCP11X2Q5H9J9 407 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 PM20D1Q6GTS8 502 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 ALYREFQ86V81 257 aaKnown RBP10.99□□□□□ -0.65
MCF2L-216ENST00000439475 ZNF687Q8N1G0 1237 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 SCML4Q8N228 414 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 SLC35F5Q8WV83 523 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 ATRIPQ8WXE1 791 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 TFAP2BQ92481 460 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 NMUR1Q9HB89 426 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 ABCC13Q9NSE7 274 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 SAMSN1Q9NSI8 373 aaKnown RBP10.99□□□□□ -0.65
MCF2L-216ENST00000439475 RASAL2Q9UJF2 1139 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 DNAJC12Q9UKB3 198 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 MYO16Q9Y6X6 1858 aa10.99□□□□□ -0.65
MCF2L-216ENST00000439475 COL4A2P08572 1712 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 PATJQ8NI35 1801 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 OTOL1A6NHN0 477 aaPredicted RBP10.98□□□□□ -0.65
MCF2L-216ENST00000439475 PROB1E7EW31 1015 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 SART1O43290 800 aaKnown RBP10.98□□□□□ -0.65
MCF2L-216ENST00000439475 THAP12O43422 761 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 FBXO21O94952 628 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 LETM1O95202 739 aaPredicted RBP10.98□□□□□ -0.65
MCF2L-216ENST00000439475 TBX18O95935 607 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 ADH5P11766 374 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 CHKAP35790 457 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 EIF2DP41214 584 aaKnown RBP10.98□□□□□ -0.65
MCF2L-216ENST00000439475 MRE11P49959 708 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 ZNF132P52740 706 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 SNX16P57768 344 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 ADIGQ0VDE8 80 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 EFEMP1Q12805 493 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 CCINQ13939 588 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 MEA1Q16626 185 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 PKDCCQ504Y2 493 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 FKBP15Q5T1M5 1219 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 RHBDF2Q6PJF5 856 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 SCD5Q86SK9 330 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 ZNF606Q8WXB4 792 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 IRGQQ8WZA9 623 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 SECISBP2LQ93073 1101 aaKnown RBP10.98□□□□□ -0.65
MCF2L-216ENST00000439475 ZFRQ96KR1 1074 aaKnown RBP10.98□□□□□ -0.65
MCF2L-216ENST00000439475 XPO6Q96QU8 1125 aaKnown RBP10.98□□□□□ -0.65
MCF2L-216ENST00000439475 PNKPQ96T60 521 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 TRIM62Q9BVG3 475 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 PDCL3Q9H2J4 239 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 SPHK2Q9NRA0 654 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 ST7Q9NRC1 585 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 RBM12Q9NTZ6 932 aaKnown RBP10.98□□□□□ -0.65
MCF2L-216ENST00000439475 OSER1Q9NX31 292 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 WDR35Q9P2L0 1181 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 NUDT5Q9UKK9 219 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 CEP83Q9Y592 693 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 CACNA1IQ9P0X4 2223 aa10.98□□□□□ -0.65
MCF2L-216ENST00000439475 SLC12A8A0AV02 714 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 SMTNL1A8MU46 457 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 TULP2O00295 520 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 EGFP01133 1207 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 APODP05090 189 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 CYP17A1P05093 508 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 HOXD11P31277 338 aaPredicted RBP10.97□□□□□ -0.65
MCF2L-216ENST00000439475 PGFP49763 221 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 RGS7P49802 495 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 DAOAP59103 153 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 MYL5Q02045 173 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 ANO4Q32M45 955 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 LY6G5CQ5SRR4 150 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 BSPRYQ5W0U4 402 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 FSTL4Q6MZW2 842 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 PMF1Q6P1K2 205 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 GJB7Q6PEY0 223 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 MIB1Q86YT6 1006 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 BBS7Q8IWZ6 715 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 STK32AQ8WU08 396 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 ACDQ96AP0 544 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 CHFRQ96EP1 664 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 NOX5Q96PH1 765 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 VPS16Q9H269 839 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 PRMT8Q9NR22 394 aaPredicted RBP10.97□□□□□ -0.65
MCF2L-216ENST00000439475 ZSCAN32Q9NX65 697 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 MARCH2Q9P0N8 246 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 SLC8A2Q9UPR5 921 aa10.97□□□□□ -0.65
MCF2L-216ENST00000439475 PCDHGA2Q9Y5H1 932 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms