RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ARL10Q8N8L6 244 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 ZSCAN18Q8TBC5 510 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 FAM81AQ8TBF8 368 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 MORC4Q8TE76 937 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 OXNAD1Q96HP4 312 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 CAMKK2Q96RR4 588 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 LPIN3Q9BQK8 851 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 FDXACB1Q9BRP7 624 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 KRT82Q9NSB4 513 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 MYO18AQ92614 2054 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 SBF2Q86WG5 1849 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 GRIN3BO60391 1043 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 RBP3P10745 1247 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 ANPEPP15144 967 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 POLR2BP30876 1174 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 ELK3P41970 407 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 NAMPTP43490 491 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 PRAMEP78395 509 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 OGDHQ02218 1023 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 C11orf91Q3C1V1 193 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 FKBP1CQ5VVH2 108 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 CES3Q6UWW8 571 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 SPOCD1Q6ZMY3 1216 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 CATSPERGQ6ZRH7 1159 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 SNX31Q8N9S9 440 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 GRAMD1AQ96CP6 724 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 CENPKQ9BS16 269 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 NIF3L1Q9GZT8 377 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 VCX3BQ9H321 246 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 VCX3AQ9NNX9 186 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 KLK14Q9P0G3 267 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 ARHGAP28Q9P2N2 729 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 E9PBE3 544 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 KLHL41O60662 606 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 ATP5HO75947 161 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 NFICP08651 508 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 TBXAS1P24557 533 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 IVDP26440 423 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 SLC1A1P43005 524 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 GTF2A2P52657 109 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 PKNOX1P55347 436 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 EIF3EP60228 445 aaKnown RBP10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 IFRD2Q12894 506 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 TBC1D25Q3MII6 688 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 RAB6CQ53S08 254 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 OR52E8Q6IFG1 317 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 NLGN2Q8NFZ4 835 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 OR6B3Q8NGW1 331 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 SPATA18Q8TC71 538 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 SERAC1Q96JX3 654 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 RAB6CQ9H0N0 254 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 ASCC2Q9H1I8 757 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 LRRC19Q9H756 370 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 HMGXB4Q9UGU5 601 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 ANGPTL2Q9UKU9 493 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 STARD13Q9Y3M8 1113 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 SNX9Q9Y5X1 595 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 SPATA31C2B4DYI2 1134 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 KBTBD13C9JR72 458 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 LYPLA2O95372 231 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 ARIH2O95376 493 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 MT-CO1P00395 513 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 ACADSP16219 412 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 PDGFRAP16234 1089 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 ADORA2BP29275 332 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 ETFBP38117 255 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 DRG2P55039 364 aaKnown RBP10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 GK3PQ14409 553 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 PDK1Q15118 436 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 MAP7D3Q8IWC1 876 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 C12orf56Q8IXR9 622 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 UNC5BQ8IZJ1 945 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 PDIK1LQ8N165 341 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 RNF169Q8NCN4 708 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 FAM156AQ8NDB6 213 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 CD101Q93033 1021 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 FAF2Q96CS3 445 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 PRPF18Q99633 342 aaKnown RBP10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 CGRRF1Q99675 332 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 TIPINQ9BVW5 301 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 GEMIN4P57678 1058 aaKnown RBP10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 AP2B1P63010 937 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 BST1Q10588 318 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 MOGSQ13724 837 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 MAP7Q14244 749 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 NRF1Q16656 503 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 RBM44Q6ZP01 1051 aaKnown RBP10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 CDHR3Q6ZTQ4 885 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 HPS6Q86YV9 775 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 TMPRSS6Q8IU80 811 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 SPATC1LQ9H0A9 340 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 SEMA6AQ9H2E6 1030 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 RAB6BQ9NRW1 208 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 FAF1Q9UNN5 650 aaPredicted RBP10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 SH3BP1Q9Y3L3 701 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 CDK5RAP2Q96SN8 1893 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 A0A0B4J269 797 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 MCF2LO15068 1137 aa10.31□□□□□ -0.76
CDC42SE1-202ENST00000439374 MAFGO15525 162 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms