RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 TMX2Q9Y320 296 aa14.08□□□□□ -0.16
PCNX3-202ENST00000439247 HBS1LQ9Y450 684 aaKnown RBP14.08□□□□□ -0.16
PCNX3-202ENST00000439247 COMMD3-BMI1R4GMX3 469 aa14.08□□□□□ -0.16
PCNX3-202ENST00000439247 A0A0B4J269 797 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 TOM1L1O75674 476 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 RBP3P10745 1247 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 UQCRBP14927 111 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 PSMA2P25787 234 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 SERPINB6P35237 376 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 LIG4P49917 911 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 EFHC1Q5JVL4 640 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 TMCO4Q5TGY1 634 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 VWA5B1Q5TIE3 1220 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 GPAT2Q6NUI2 795 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 TFAP2BQ92481 460 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 VCPIP1Q96JH7 1222 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 CALN1Q9BXU9 219 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 WWP1Q9H0M0 922 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 PLAC1Q9HBJ0 212 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 SLC9A2Q9UBY0 812 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 TEX264Q9Y6I9 313 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 CCDC160A6NGH7 325 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 CAPN8A6NHC0 703 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 LRCH4O75427 683 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 RFPL1O75677 317 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 C1QAP02745 245 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 ASNSP08243 561 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 PABPC4LP0CB38 370 aaKnown RBP14.07□□□□□ -0.16
PCNX3-202ENST00000439247 SNRPFP62306 86 aaKnown RBP14.07□□□□□ -0.16
PCNX3-202ENST00000439247 PDK3Q15120 406 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 GRAMD1BQ3KR37 738 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 MOB2Q70IA6 237 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 USP37Q86T82 979 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 TRIM74Q86UV6 250 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 TRIM73Q86UV7 250 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 C4orf19Q8IY42 314 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 POLIQ9UNA4 740 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 ZNF536O15090 1300 aa14.07□□□□□ -0.16
PCNX3-202ENST00000439247 E2F8A0AVK6 867 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 ZC3H11AO75152 810 aaKnown RBP eCLIP14.06□□□□□ -0.164e-14■■■■■ 31.3
PCNX3-202ENST00000439247 CSH1P0DML2 217 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 CSH2P0DML3 217 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 SLC25A11Q02978 314 aaKnown RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 DNAL1Q4LDG9 190 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 TRMT10BQ6PF06 316 aaKnown RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 CCDC33Q8N5R6 958 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 SPATA18Q8TC71 538 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 SOX13Q9UN79 622 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 TTLL3Q9Y4R7 772 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 LOXHD1Q8IVV2 1947 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 RAG1P15918 1043 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 MCCD1P59942 119 aaPredicted RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 HNRNPDQ14103 355 aaKnown RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 FAM91A1Q658Y4 838 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 TRIM72Q6ZMU5 477 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 RBM44Q6ZP01 1051 aaKnown RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 CRLF3Q8IUI8 442 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 UNC5BQ8IZJ1 945 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 NDUFAF2Q8N183 169 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 C7orf26Q96N11 449 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 KLHL4Q9C0H6 718 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 XPNPEP1Q9NQW7 623 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 DNAAF2Q9NVR5 837 aaKnown RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 GABBR1Q9UBS5 961 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 SDR42E2A6NKP2 422 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 ASLP04424 464 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 EDN1P05305 212 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 ATP6V1B1P15313 513 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 KDELR1P24390 212 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 MSX2P35548 267 aaPredicted RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 SH3PXD2AQ5TCZ1 1133 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 TTC39BQ5VTQ0 682 aaPredicted RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 DCPSQ96C86 337 aaKnown RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 RBAKQ9NYW8 714 aaPredicted RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 AGO2Q9UKV8 859 aaKnown RBP14.06□□□□□ -0.16
PCNX3-202ENST00000439247 SH3BP1Q9Y3L3 701 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 PPME1Q9Y570 386 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 UBIAD1Q9Y5Z9 338 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 SLC4A7Q9Y6M7 1214 aa14.06□□□□□ -0.16
PCNX3-202ENST00000439247 HMX2A2RU54 273 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 F5H423 210 aaPredicted RBP14.05□□□□□ -0.16
PCNX3-202ENST00000439247 PIK3R2O00459 728 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 EXTL3O43909 919 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 BTKQ06187 659 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 C1orf228Q6PIY5 440 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 SLC26A11Q86WA9 606 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 SULF1Q8IWU6 871 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 FAF2Q96CS3 445 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 CYTH4Q9UIA0 394 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 AK5Q9Y6K8 562 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 KLF11O14901 512 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 VILLO15195 856 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 SMIM18P0DKX4 95 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 HSD17B4P51659 736 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 RPL10AP62906 217 aaKnown RBP14.05□□□□□ -0.16
PCNX3-202ENST00000439247 FOLH1Q04609 750 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 PSMD6Q15008 389 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 TLR1Q15399 786 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 RABGAP1LQ5R372 815 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 LRRC38Q5VT99 294 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms