RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 DESP17661 470 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 CBX2Q14781 532 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-208ENST00000438518 HECTD3Q5T447 861 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 SCD5Q86SK9 330 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 SHKBP1Q8TBC3 707 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 CLEC4CQ8WTT0 213 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 SLC2A13Q96QE2 648 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 APOL5Q9BWW9 433 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 TASP1Q9H6P5 420 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.27■□□□□ 0.68
HDAC6-208ENST00000438518 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.27■□□□□ 0.68
HDAC6-208ENST00000438518 UVRAGQ9P2Y5 699 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 CHORDC1Q9UHD1 332 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-208ENST00000438518 STAP1Q9ULZ2 295 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 PCDHA13Q9Y5I0 950 aa19.27■□□□□ 0.68
HDAC6-208ENST00000438518 H3BQ06 376 aaPredicted RBP19.26■□□□□ 0.67
HDAC6-208ENST00000438518 MBTPS2O43462 519 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 TLR5O60602 858 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 OLFM2O95897 454 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 OAS1P00973 400 aaKnown RBP19.26■□□□□ 0.67
HDAC6-208ENST00000438518 CYP1A2P05177 515 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 RARGP13631 454 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 ABCB4P21439 1286 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 WEE1P30291 646 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 NOS2P35228 1153 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 CCR2P41597 374 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 VAV2P52735 878 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 MTF1Q14872 753 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 TCEAL1Q15170 157 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 SLC5A9Q2M3M2 681 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 C2CD6Q53TS8 623 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 PPP1R15BQ5SWA1 713 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 RHOT2Q8IXI1 618 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 RNF139Q8WU17 664 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 THAP2Q9H0W7 228 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 NMUR1Q9HB89 426 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 METTL5Q9NRN9 209 aaKnown RBP19.26■□□□□ 0.67
HDAC6-208ENST00000438518 GDE1Q9NZC3 331 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 TMEM59LQ9UK28 342 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 USTQ9Y2C2 406 aa19.26■□□□□ 0.67
HDAC6-208ENST00000438518 USP15Q9Y4E8 981 aaPredicted RBP19.26■□□□□ 0.67
HDAC6-208ENST00000438518 HELZP42694 1942 aaKnown RBP19.25■□□□□ 0.67
HDAC6-208ENST00000438518 TRAV19A0A0A6YYK7 116 aa19.25■□□□□ 0.67
HDAC6-208ENST00000438518 GOLGA8SH3BPF8 625 aa19.25■□□□□ 0.67
HDAC6-208ENST00000438518 MOSPD3O75425 235 aa19.25■□□□□ 0.67
HDAC6-208ENST00000438518 ABL1P00519 1130 aa19.25■□□□□ 0.67
HDAC6-208ENST00000438518 MATKP42679 507 aa19.25■□□□□ 0.67
HDAC6-208ENST00000438518 NTHL1P78549 312 aa19.25■□□□□ 0.67
HDAC6-208ENST00000438518 AAK1Q2M2I8 961 aa19.25■□□□□ 0.67
HDAC6-208ENST00000438518 MSANTD2Q6P1R3 559 aa19.25■□□□□ 0.67
HDAC6-208ENST00000438518 DCUN1D2Q6PH85 259 aa19.25■□□□□ 0.67
HDAC6-208ENST00000438518 RSRC2Q7L4I2 434 aaKnown RBP19.25■□□□□ 0.67
HDAC6-208ENST00000438518 FNIP1Q8TF40 1166 aa19.25■□□□□ 0.67
HDAC6-208ENST00000438518 PIWIL1Q96J94 861 aaKnown RBP19.25■□□□□ 0.67
HDAC6-208ENST00000438518 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.25■□□□□ 0.67
HDAC6-208ENST00000438518 A0A0A6YYK5 440 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-208ENST00000438518 BTNL10A8MVZ5 291 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 CCDC175P0C221 793 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 NCAM1P13591 858 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 ATP5C1P36542 298 aaKnown RBP19.24■□□□□ 0.67
HDAC6-208ENST00000438518 KPNA1P52294 538 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-208ENST00000438518 NNTQ13423 1086 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 MAMLD1Q13495 774 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 TEAD2Q15562 447 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 GPR158Q5T848 1215 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 GET4Q7L5D6 327 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-208ENST00000438518 KIAA1328Q86T90 577 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 FEZF2Q8TBJ5 459 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 RFFLQ8WZ73 363 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 KHSRPQ92945 711 aaKnown RBP eCLIP19.24■□□□□ 0.67
HDAC6-208ENST00000438518 TCEAL4Q96EI5 215 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 NACA2Q9H009 215 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 SMOC2Q9H3U7 446 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 POMKQ9H5K3 350 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 OSER1Q9NX31 292 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 DNMT3LQ9UJW3 386 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 CDH7Q9ULB5 785 aa19.24■□□□□ 0.67
HDAC6-208ENST00000438518 PJA2O43164 708 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 FYNP06241 537 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 CEBPBP17676 345 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 AVPR1AP37288 418 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 PTPN9P43378 593 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 SLC7A9P82251 487 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 CYP4F8P98187 520 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 SMAD2Q15796 467 aaKnown RBP19.23■□□□□ 0.67
HDAC6-208ENST00000438518 CLUL1Q15846 466 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 HFE2Q6ZVN8 426 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 OTOP3Q7RTS5 596 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 NPAS3Q8IXF0 933 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 DEFB106AQ8N104 65 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 ITFG1Q8TB96 612 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 NDRG1Q92597 394 aaKnown RBP19.23■□□□□ 0.67
HDAC6-208ENST00000438518 FGF13Q92913 245 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 ACSF2Q96CM8 615 aaPredicted RBP19.23■□□□□ 0.67
HDAC6-208ENST00000438518 SERPINB11Q96P15 392 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 NCAPGQ9BPX3 1015 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 DDX23Q9BUQ8 820 aaKnown RBP19.23■□□□□ 0.67
HDAC6-208ENST00000438518 PACSIN1Q9BY11 444 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 TSGA10Q9BZW7 698 aa19.23■□□□□ 0.67
HDAC6-208ENST00000438518 KIF9Q9HAQ2 790 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms