RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NKD2Q969F2 451 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 NRBF2Q96F24 287 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 LRRC40Q9H9A6 602 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 MRGBPQ9NV56 204 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 IL1RAPL1Q9NZN1 696 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 BAG5Q9UL15 447 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 CORO1CQ9ULV4 474 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 BARX2Q9UMQ3 279 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 A0A0B4J269 797 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 GOLGA8CPA6NN73 597 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 PMM2O15305 246 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 CHADO15335 359 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 KRT36O76013 467 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 ASS1P00966 412 aaKnown RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 HMGCRP04035 888 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 TGFB3P10600 412 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 DPEP1P16444 411 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 TCN1P20061 433 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 RANBP1P43487 201 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 SERPINB8P50452 374 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 NDST1P52848 882 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 BST1Q10588 318 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 SLC12A1Q13621 1099 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 ZCCHC23Q6ZST2 131 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 CLNKQ7Z7G1 428 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 FAM131BQ86XD5 332 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 DEFB107AQ8IZN7 70 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 POU5F2Q8N7G0 328 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 PBXIP1Q96AQ6 731 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 KLHL4Q9C0H6 718 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 EML4Q9HC35 981 aaKnown RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 WRAP73Q9P2S5 460 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 PIN4Q9Y237 131 aaKnown RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 E9PBE3 544 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 DFFAO00273 331 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 TIMM44O43615 452 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 TBC1D12O60347 775 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 KLHL41O60662 606 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 SLC1A6P48664 564 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 ITGA9Q13797 1035 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 FASTKD3Q14CZ7 662 aaKnown RBP6.9□□□□□ -1.3
CSDE1-205ENST00000438362 PDPK2PQ6A1A2 396 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 NAPEPLDQ6IQ20 393 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 KYAT3Q6YP21 454 aaKnown RBP6.9□□□□□ -1.3
CSDE1-205ENST00000438362 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.9□□□□□ -1.31e-6■■■■■ 34.7
CSDE1-205ENST00000438362 CYP4X1Q8N118 509 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 COLGALT1Q8NBJ5 622 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 PPHLN1Q8NEY8 458 aaKnown RBP6.9□□□□□ -1.3
CSDE1-205ENST00000438362 SLC7A14Q8TBB6 771 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 USP33Q8TEY7 942 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 BSNDQ8WZ55 320 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 SLC10A4Q96EP9 437 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 ARHGEF3Q9NR81 526 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 FBXO6Q9NRD1 293 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-205ENST00000438362 GGA3Q9NZ52 723 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 FNDC3AQ9Y2H6 1198 aaKnown RBP6.9□□□□□ -1.3
CSDE1-205ENST00000438362 PPME1Q9Y570 386 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 ZNF142P52746 1687 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-205ENST00000438362 TCEA3O75764 348 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 S100BP04271 92 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-205ENST00000438362 ATP6V1B1P15313 513 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 ATP4AP20648 1035 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 IL10P22301 178 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 ECHS1P30084 290 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 SERPINB5P36952 375 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 SLC26A2P50443 739 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 TGFB2P61812 414 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 YWHAHQ04917 246 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-205ENST00000438362 TDRPQ86YL5 185 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 MYLK4Q86YV6 388 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-205ENST00000438362 FAM193BQ96PV7 902 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-205ENST00000438362 SIKE1Q9BRV8 207 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 PHACTR1Q9C0D0 580 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 ASB7Q9H672 318 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 SLC17A7Q9P2U7 560 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 EFR3BQ9Y2G0 817 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 SSUH2Q9Y2M2 353 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 ANGPTL3Q9Y5C1 460 aa6.9□□□□□ -1.3
CSDE1-205ENST00000438362 hCG_2014768A0A024R1R8 64 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 TCRBV9S1A1TA0A576 114 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 E5RJQ4 531 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 M0QYT0 321 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 CSDE1O75534 798 aaKnown RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 NPTXRO95502 500 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 C4BPAP04003 597 aaKnown RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 UNGP13051 313 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 FOXN2P32314 431 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 GP5P40197 560 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 BCAT1P54687 386 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 CDC42EP1Q00587 391 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 CNTN2Q02246 1040 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 EN1Q05925 392 aaPredicted RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 TBL3Q12788 808 aaKnown RBP6.9□□□□□ -1.31
CSDE1-205ENST00000438362 AMHR2Q16671 573 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 WLSQ5T9L3 541 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 KCNT2Q6UVM3 1135 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 NPNTQ6UXI9 565 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 STRA8Q7Z7C7 330 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 UNC45BQ8IWX7 931 aa6.9□□□□□ -1.31
CSDE1-205ENST00000438362 NRDE2Q9H7Z3 1164 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms