RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 FEZ2Q9UHY8 353 aaPredicted RBP22.02■■□□□ 1.12
PTPRF-207ENST00000436724 NLRC5Q86WI3 1866 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 KIAA0100Q14667 2235 aaKnown RBP22.02■■□□□ 1.12
PTPRF-207ENST00000436724 DAB1O75553 588 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 CXCL10P02778 98 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 IVDP26440 423 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 HSPA9P38646 679 aaKnown RBP22.02■■□□□ 1.12
PTPRF-207ENST00000436724 SLC25A52Q3SY17 297 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 PPP6R3Q5H9R7 873 aaPredicted RBP22.02■■□□□ 1.12
PTPRF-207ENST00000436724 TMC3Q7Z5M5 1100 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 CEP57Q86XR8 500 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 PIK3R5Q8WYR1 880 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 TMEM121Q9BTD3 319 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 ETS1P14921 441 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 DHX9Q08211 1270 aaKnown RBP22.01■■□□□ 1.11
PTPRF-207ENST00000436724 OASLQ15646 514 aaKnown RBP22.01■■□□□ 1.11
PTPRF-207ENST00000436724 UAP1Q16222 522 aaPredicted RBP22.01■■□□□ 1.11
PTPRF-207ENST00000436724 NPNTQ6UXI9 565 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.01■■□□□ 1.117e-8■□□□□ 9.6
PTPRF-207ENST00000436724 ZIM3Q96PE6 472 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 GPR62Q9BZJ7 368 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 POPDC2Q9HBU9 364 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 PCDH18Q9HCL0 1135 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 ADAM28Q9UKQ2 775 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 VWA8A3KMH1 1905 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 PTPRDP23468 1912 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 ARHGEF37A1IGU5 675 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 TBKBP1A7MCY6 615 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 CAPN15O75808 1086 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 UPP2O95045 317 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 ZSCAN5DPP0CG00 497 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 CYP2F1P24903 491 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 SLC11A1P49279 550 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 VCPP55072 806 aaKnown RBP22.01■■□□□ 1.11
PTPRF-207ENST00000436724 SLC39A12Q504Y0 691 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 ERMARDQ5T6L9 678 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 DRICH1Q6PGQ1 229 aaPredicted RBP22.01■■□□□ 1.11
PTPRF-207ENST00000436724 FOXR1Q6PIV2 292 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 ZNF365Q70YC5 407 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 BHLHA9Q7RTU4 235 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 SLC35B2Q8TB61 432 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 ADAM32Q8TC27 787 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 TEKT4Q8WW24 435 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 TOX2Q96NM4 488 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 DMAP1Q9NPF5 467 aaPredicted RBP22.01■■□□□ 1.11
PTPRF-207ENST00000436724 CNGB3Q9NQW8 809 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 TMPRSS4Q9NRS4 437 aa22.01■■□□□ 1.11
PTPRF-207ENST00000436724 MDM4O15151 490 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 ZBED1O96006 694 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 NOS2P35228 1153 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 HSD17B3P37058 310 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 ADCY8P40145 1251 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 FAM171A1Q5VUB5 890 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 ALS2CLQ60I27 953 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 B4GALNT4Q76KP1 1039 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 STRADAQ7RTN6 431 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 TMEM173Q86WV6 379 aaPredicted RBP22■■□□□ 1.11
PTPRF-207ENST00000436724 NPAS4Q8IUM7 802 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 IQCKQ8N0W5 287 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 SCAMP5Q8TAC9 235 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 ART4Q93070 314 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 SLC2A13Q96QE2 648 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 NPY6RQ99463 290 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 MAK16Q9BXY0 300 aaKnown RBP22■■□□□ 1.11
PTPRF-207ENST00000436724 DHX35Q9H5Z1 703 aaKnown RBP22■■□□□ 1.11
PTPRF-207ENST00000436724 MARCH5Q9NX47 278 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 ATP8A1Q9Y2Q0 1164 aa22■■□□□ 1.11
PTPRF-207ENST00000436724 M0QYT0 321 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 TRAPPC3O43617 180 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 FBXO21O94952 628 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 OAZ2O95190 189 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 KRT14P02533 472 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 KLRC2P26717 231 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 NME3Q13232 169 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 MAPRE1Q15691 268 aaKnown RBP21.99■■□□□ 1.11
PTPRF-207ENST00000436724 VARS2Q5ST30 1063 aaKnown RBP21.99■■□□□ 1.11
PTPRF-207ENST00000436724 SYDE1Q6ZW31 735 aaPredicted RBP21.99■■□□□ 1.11
PTPRF-207ENST00000436724 SPATA2LQ8IUW3 424 aaPredicted RBP21.99■■□□□ 1.11
PTPRF-207ENST00000436724 PYROXD2Q8N2H3 581 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 NKD2Q969F2 451 aaPredicted RBP21.99■■□□□ 1.11
PTPRF-207ENST00000436724 NT5C3BQ969T7 300 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 VWCEQ96DN2 955 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 RNF157Q96PX1 679 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 CWC15Q9P013 229 aaKnown RBP21.99■■□□□ 1.11
PTPRF-207ENST00000436724 TBX21Q9UL17 535 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 AP4E1Q9UPM8 1137 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 CAPN9O14815 690 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 ALDH2P05091 517 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 IFRD2Q12894 506 aaPredicted RBP21.99■■□□□ 1.11
PTPRF-207ENST00000436724 CALCOCO2Q13137 446 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 PDK2Q15119 407 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 CFAP58Q5T655 872 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 MAP7D3Q8IWC1 876 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 ALLCQ8N6M5 410 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 EDEM1Q92611 657 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 SNF8Q96H20 258 aa21.99■■□□□ 1.11
PTPRF-207ENST00000436724 GOLGA6CA6NDK9 693 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 APOC4-APOC2K7ER74 178 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 APOC2P02655 101 aa21.98■■□□□ 1.11
PTPRF-207ENST00000436724 IVLP07476 585 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms