RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SLC14A1Q13336 389 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 SURF1Q15526 300 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 WDR72Q3MJ13 1102 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 SYCP2LQ5T4T6 812 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 TPGS1Q6ZTW0 290 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 TOGARAM2Q6ZUX3 1019 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 PDZD8Q8NEN9 1154 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 SCFD1Q8WVM8 642 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 BHMTQ93088 406 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 ZNF419Q96HQ0 510 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-213ENST00000436675 BBC3Q96PG8 261 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-213ENST00000436675 MIR1-1HGQ9H1L0 117 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 FAM124BQ9H5Z6 455 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-213ENST00000436675 HSPBP1Q9NZL4 362 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 NXF1Q9UBU9 619 aaKnown RBP15.71■□□□□ 0.11
HDAC8-213ENST00000436675 SMC3Q9UQE7 1217 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 APOBEC2Q9Y235 224 aaKnown RBP15.71■□□□□ 0.11
HDAC8-213ENST00000436675 CABIN1Q9Y6J0 2220 aa15.71■□□□□ 0.1
HDAC8-213ENST00000436675 GOLGA8CPA6NN73 597 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 MEI4A8MW99 385 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 TACC1O75410 805 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 CLSTN1O94985 981 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 NEFLP07196 543 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 PGFP49763 221 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 ALCAMQ13740 583 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 WDR45BQ5MNZ6 344 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 WDR49Q8IV35 697 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 ZCCHC9Q8N567 271 aaKnown RBP15.7■□□□□ 0.1
HDAC8-213ENST00000436675 B3GALNT2Q8NCR0 500 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 MRGPRX1Q96LB2 322 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 BBS2Q9BXC9 721 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 IL21RQ9HBE5 538 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 CD248Q9HCU0 757 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 SUSD2Q9UGT4 822 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 STARD13Q9Y3M8 1113 aa15.7■□□□□ 0.1
HDAC8-213ENST00000436675 EIF4E1BA6NMX2 242 aaKnown RBP15.69■□□□□ 0.1
HDAC8-213ENST00000436675 CD2BP2O95400 341 aaKnown RBP15.69■□□□□ 0.1
HDAC8-213ENST00000436675 TBX18O95935 607 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 TYRP14679 529 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 SLC5A3P53794 718 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 CDH8P55286 799 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 CEBPZQ03701 1054 aaKnown RBP15.69■□□□□ 0.1
HDAC8-213ENST00000436675 OVCA2Q8WZ82 227 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 FOXJ1Q92949 421 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 ELMO3Q96BJ8 720 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 CCDC127Q96BQ5 260 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 TOE1Q96GM8 510 aaKnown RBP15.69■□□□□ 0.1
HDAC8-213ENST00000436675 XPO6Q96QU8 1125 aaKnown RBP15.69■□□□□ 0.1
HDAC8-213ENST00000436675 GABRG3Q99928 467 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 GPR174Q9BXC1 333 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 PRDM16Q9HAZ2 1276 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 FBXO2Q9UK22 296 aaPredicted RBP15.69■□□□□ 0.1
HDAC8-213ENST00000436675 PCOLCE2Q9UKZ9 415 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 SHROOM3Q8TF72 1996 aa15.69■□□□□ 0.1
HDAC8-213ENST00000436675 FRMD3A2A2Y4 597 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 KIAA0391O15091 583 aaKnown RBP15.68■□□□□ 0.1
HDAC8-213ENST00000436675 TXLNAP40222 546 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 STAT6P42226 847 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 MYL6P60660 151 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 TRPC3Q13507 836 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 BRAPQ7Z569 592 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 FAM35AQ86V20 835 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 GAREM1Q9H706 876 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 SMYD3Q9H7B4 428 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 PPP4R2Q9NY27 417 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 PLK2Q9NYY3 685 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 NUMA1Q14980 2115 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 ATP8B3O60423 1300 aa15.68■□□□□ 0.1
HDAC8-213ENST00000436675 A0A087X0B3 334 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 A0A1B0GTW7 788 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 VPS37CA5D8V6 355 aaPredicted RBP15.67■□□□□ 0.1
HDAC8-213ENST00000436675 CLIC2O15247 247 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 CACNG3O60359 315 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 TLR5O60602 858 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 CBFA2T3O75081 653 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 AP1G2O75843 785 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 ATXN1LP0C7T5 689 aaKnown RBP15.67■□□□□ 0.1
HDAC8-213ENST00000436675 NCAM1P13591 858 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 CD6P30203 668 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 HOXD13P35453 343 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 DGKGP49619 791 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 CYP2J2P51589 502 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 RABEP1Q15276 862 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 SNRNP35Q16560 246 aaKnown RBP15.67■□□□□ 0.1
HDAC8-213ENST00000436675 CCDC157Q569K6 752 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 SCARA5Q6ZMJ2 495 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 PAQR9Q6ZVX9 377 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 CACUL1Q86Y37 369 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 CCDC65Q8IXS2 484 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 PDILTQ8N807 584 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 CRELD1Q96HD1 420 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 CGRRF1Q99675 332 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 DMAP1Q9NPF5 467 aaPredicted RBP15.67■□□□□ 0.1
HDAC8-213ENST00000436675 SRPRBQ9Y5M8 271 aaKnown RBP15.67■□□□□ 0.1
HDAC8-213ENST00000436675 TMEM131Q92545 1883 aa15.67■□□□□ 0.1
HDAC8-213ENST00000436675 MDM4O15151 490 aa15.66■□□□□ 0.1
HDAC8-213ENST00000436675 CILPO75339 1184 aa15.66■□□□□ 0.1
HDAC8-213ENST00000436675 ZDHHC11BP0C7U3 371 aa15.66■□□□□ 0.1
HDAC8-213ENST00000436675 TUBP50607 506 aa15.66■□□□□ 0.1
HDAC8-213ENST00000436675 CYP4F3Q08477 520 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms