RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 UBQLN1Q9UMX0 589 aaKnown RBP10.84□□□□□ -0.67
CD44-210ENST00000434472 SNX9Q9Y5X1 595 aa10.84□□□□□ -0.67
CD44-210ENST00000434472 MGAMO43451 1857 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 EVPLQ92817 2033 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 TCRBV9S1A1TA0A576 114 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 GCATO75600 419 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 MMP3P08254 477 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 SNRPAP09012 282 aaKnown RBP10.83□□□□□ -0.68
CD44-210ENST00000434472 DHRS4L1P0CG22 281 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 IL4RP24394 825 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 ADRA1DP25100 572 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 RBL1P28749 1068 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 PNPLA4P41247 253 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 RPL34P49207 117 aaKnown RBP10.83□□□□□ -0.68
CD44-210ENST00000434472 SERPINB9P50453 376 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 NEK3P51956 506 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 BCAT1P54687 386 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 YWHAZP63104 245 aaKnown RBP10.83□□□□□ -0.68
CD44-210ENST00000434472 SARNPP82979 210 aaKnown RBP10.83□□□□□ -0.68
CD44-210ENST00000434472 DPYSL2Q16555 572 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 KBTBD12Q3ZCT8 623 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 DUSP28Q4G0W2 176 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 MARCH8Q5T0T0 291 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 GJC2Q5T442 439 aaPredicted RBP10.83□□□□□ -0.68
CD44-210ENST00000434472 IQSEC1Q6DN90 963 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 NOTUMQ6P988 496 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 SLC26A9Q7LBE3 791 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 CATSPER4Q7RTX7 472 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 ACOT1Q86TX2 421 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 CRYBG2Q8N1P7 616 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 TMEM130Q8N3G9 435 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 OR6J1Q8NGC5 347 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 OR6B3Q8NGW1 331 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 PCDH19Q8TAB3 1148 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 CENPIQ92674 756 aaPredicted RBP10.83□□□□□ -0.68
CD44-210ENST00000434472 MTBPQ96DY7 904 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 L3MBTL3Q96JM7 780 aaPredicted RBP10.83□□□□□ -0.68
CD44-210ENST00000434472 ZNF560Q96MR9 790 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 TRIM55Q9BYV6 548 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 ADAMTS10Q9H324 1103 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 NRDE2Q9H7Z3 1164 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 SLCO1B3Q9NPD5 702 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 MKS1Q9NXB0 559 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 CNTN3Q9P232 1028 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 RPL26L1Q9UNX3 145 aaKnown RBP10.83□□□□□ -0.68
CD44-210ENST00000434472 CHKBQ9Y259 395 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 HEY1Q9Y5J3 304 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 SBF1O95248 1867 aa10.83□□□□□ -0.68
CD44-210ENST00000434472 RALGAPA2Q2PPJ7 1873 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 DCAF8L1A6NGE4 600 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 A8MXQ7 604 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 HACD1B0YJ81 288 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 PIK3R2O00459 728 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 COPEO14579 308 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 KLF11O14901 512 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 PAPSS1O43252 624 aaPredicted RBP10.82□□□□□ -0.68
CD44-210ENST00000434472 GRAP2O75791 330 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 KRT16P08779 473 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 PRKCHP24723 683 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 CYP2F1P24903 491 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 GJA5P36382 358 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 FAAP100Q0VG06 881 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 EFHC1Q5JVL4 640 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 DPY19L2Q6NUT2 758 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 STRADAQ7RTN6 431 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 NLRP9Q7RTR0 991 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 LRRC6Q86X45 466 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 PSTKQ8IV42 348 aaKnown RBP10.82□□□□□ -0.68
CD44-210ENST00000434472 IGDCC3Q8IVU1 814 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 VPS52Q8N1B4 723 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 C12orf29Q8N999 325 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 ANKRD52Q8NB46 1076 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 GIMAP7Q8NHV1 300 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 SPOCK2Q92563 424 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 KHSRPQ92945 711 aaKnown RBP eCLIP10.82□□□□□ -0.68
CD44-210ENST00000434472 CFAP36Q96G28 342 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 PIWIL1Q96J94 861 aaKnown RBP10.82□□□□□ -0.68
CD44-210ENST00000434472 HSFY1Q96LI6 401 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 QKIQ96PU8 341 aaKnown RBP eCLIP10.82□□□□□ -0.68
CD44-210ENST00000434472 FERMT1Q9BQL6 677 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 TSSK1BQ9BXA7 367 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 IQCGQ9H095 443 aaKnown RBP10.82□□□□□ -0.68
CD44-210ENST00000434472 SNX25Q9H3E2 840 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 XAB2Q9HCS7 855 aaKnown RBP10.82□□□□□ -0.68
CD44-210ENST00000434472 GPATCH2LQ9NWQ4 482 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 SLC5A4Q9NY91 659 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 SNTG2Q9NY99 539 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 RCOR3Q9P2K3 495 aaPredicted RBP10.82□□□□□ -0.68
CD44-210ENST00000434472 ZC3H7BQ9UGR2 993 aaKnown RBP10.82□□□□□ -0.68
CD44-210ENST00000434472 ZFP69BQ9UJL9 534 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 MTO1Q9Y2Z2 717 aaKnown RBP10.82□□□□□ -0.68
CD44-210ENST00000434472 TTLL3Q9Y4R7 772 aa10.82□□□□□ -0.68
CD44-210ENST00000434472 MCM3APO60318 1980 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 SMIM35A0A1B0GVV1 85 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 PDHXO00330 501 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 TRAFD1O14545 582 aaPredicted RBP10.81□□□□□ -0.68
CD44-210ENST00000434472 KRT38O76015 456 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 SNAI1O95863 264 aaPredicted RBP10.81□□□□□ -0.68
CD44-210ENST00000434472 APOEP02649 317 aa10.81□□□□□ -0.68
CD44-210ENST00000434472 FAM163BP0C2L3 166 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms