RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 ABCC13Q9NSE7 274 aa24.3■■□□□ 1.48
SMARCAL1-208ENST00000434435 CLDND1Q9NY35 253 aa24.3■■□□□ 1.48
SMARCAL1-208ENST00000434435 GUCA1BQ9UMX6 200 aa24.3■■□□□ 1.48
SMARCAL1-208ENST00000434435 COG5Q9UP83 839 aa24.3■■□□□ 1.48
SMARCAL1-208ENST00000434435 DUSP10Q9Y6W6 482 aa24.3■■□□□ 1.48
SMARCAL1-208ENST00000434435 MACROD2A1Z1Q3 448 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 TMEM191CA6NGB0 347 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 ZDHHC11BP0C7U3 371 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 RALAP11233 206 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 HOXB8P17481 243 aaPredicted RBP24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 GPD1P21695 349 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 GABRR2P28476 465 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 CDC25CP30307 473 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 RFC1P35251 1148 aaPredicted RBP24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 FLT3P36888 993 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 EPHA5P54756 1037 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 NAP1L1P55209 391 aaKnown RBP24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 TMC5Q6UXY8 1006 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 DEFB106AQ8N104 65 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 DEFB123Q8N688 67 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 EMC1Q8N766 993 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 CDX2Q99626 313 aaPredicted RBP24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 IL21Q9HBE4 155 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 KCND1Q9NSA2 647 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 HCFC1R1Q9NWW0 138 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 CLIC5Q9NZA1 410 aa24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 DNMT3BQ9UBC3 853 aaKnown RBP24.29■■□□□ 1.48
SMARCAL1-208ENST00000434435 DENND4AQ7Z401 1863 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 C2CD4BA6NLJ0 364 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 BUB1O43683 1085 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 TADA3O75528 432 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 ABL1P00519 1130 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 F11P03951 625 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 MYL4P12829 197 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 NCAM1P13591 858 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 DESP17661 470 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 MATKP42679 507 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 CTC1Q2NKJ3 1217 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 PDZD4Q76G19 769 aaPredicted RBP24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 RNF10Q8N5U6 811 aaKnown RBP24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 FNIP1Q8TF40 1166 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 RXFP2Q8WXD0 754 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 LCMT1Q9UIC8 334 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 SALL4Q9UJQ4 1053 aa24.28■■□□□ 1.48
SMARCAL1-208ENST00000434435 ZNF840PA6NDX5 716 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 USP27XA6NNY8 438 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 MYO1FO00160 1098 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 TBX10O75333 385 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 RHOP08100 348 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 PDGFRAP16234 1089 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 SDC4P31431 198 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 NOS2P35228 1153 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 PGFP49763 221 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 COL19A1Q14993 1142 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 DCAF6Q58WW2 860 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 SNX30Q5VWJ9 437 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 TRNP1Q6NT89 227 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 SYCE2Q6PIF2 218 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 EP400NLQ6ZTU2 488 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 RSRC2Q7L4I2 434 aaKnown RBP24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 GRASPQ7Z6J2 395 aaPredicted RBP24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 RNF139Q8WU17 664 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 EDEM1Q92611 657 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 PABPC5Q96DU9 382 aaKnown RBP24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 CDK5RAP1Q96SZ6 601 aaKnown RBP24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 TRIM7Q9C029 511 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 OSER1Q9NX31 292 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 RRN3Q9NYV6 651 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 IP6K2Q9UHH9 426 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 STAP1Q9ULZ2 295 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 PAXBP1Q9Y5B6 917 aa24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 NUP210Q8TEM1 1887 aaPredicted RBP24.27■■□□□ 1.48
SMARCAL1-208ENST00000434435 DPYSL4O14531 572 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 FYNP06241 537 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 RARGP13631 454 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 FOSL2P15408 326 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 PSMA2P25787 234 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 ZNF143P52747 638 aaPredicted RBP24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 GPR149Q86SP6 731 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 TMEM150AQ86TG1 271 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 TADA2BQ86TJ2 420 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 TPCN2Q8NHX9 752 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 MRPS31Q92665 395 aaKnown RBP24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 BTBD6Q96KE9 485 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 GUCD1Q96NT3 240 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 DDX23Q9BUQ8 820 aaKnown RBP24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 OLA1Q9NTK5 396 aaKnown RBP24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 NAALADL1Q9UQQ1 740 aa24.26■■□□□ 1.47
SMARCAL1-208ENST00000434435 ZNF197O14709 1029 aa24.25■■□□□ 1.47
SMARCAL1-208ENST00000434435 TLR5O60602 858 aa24.25■■□□□ 1.47
SMARCAL1-208ENST00000434435 MOCS3O95396 460 aa24.25■■□□□ 1.47
SMARCAL1-208ENST00000434435 PTPN9P43378 593 aa24.25■■□□□ 1.47
SMARCAL1-208ENST00000434435 TUBP50607 506 aa24.25■■□□□ 1.47
SMARCAL1-208ENST00000434435 OGDHQ02218 1023 aa24.25■■□□□ 1.47
SMARCAL1-208ENST00000434435 MSANTD2Q6P1R3 559 aa24.25■■□□□ 1.47
SMARCAL1-208ENST00000434435 GAREM2Q75VX8 874 aa24.25■■□□□ 1.47
SMARCAL1-208ENST00000434435 ZSCAN30Q86W11 494 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms