RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 FGF1P05230 155 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 IFNAR2P48551 515 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 LACTB2Q53H82 288 aaPredicted RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 MRNIPQ6NTE8 343 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 DYMQ7RTS9 669 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF276Q8N554 614 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 RNF145Q96MT1 663 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 WRNIP1Q96S55 665 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 MMTAG2Q9BU76 263 aaKnown RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 EVA1AQ9H8M9 152 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 SPON1Q9HCB6 807 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ADAMTS5Q9UNA0 930 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 FAM86B1E9PN63 330 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 INO80B-WBP1J3KQ70 363 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 GCATO75600 419 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 MPOP05164 745 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 FAM86B2P0C5J1 330 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 PSMD7P51665 324 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 GTF2A1P52655 376 aaPredicted RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 MTMR2Q13614 643 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 USH1GQ495M9 461 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 RFTN2Q52LD8 501 aaPredicted RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 B3GNT9Q6UX72 402 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ATL1Q8WXF7 558 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 REPS1Q96D71 796 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 NLRP4Q96MN2 994 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 BTBD9Q96Q07 612 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 BCL7BQ9BQE9 202 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 GPAMQ9HCL2 828 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 UXTQ9UBK9 157 aaPredicted RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 CACNA1GO43497 2377 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 COL11A2P13942 1736 aaPredicted RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 SLC37A4O43826 429 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 DNAJC6O75061 913 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 SPAG7O75391 227 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ATP1A1P05023 1023 aaKnown RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 STAG3L1P0CL83 205 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 YWHAZP63104 245 aaKnown RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ERVK-24P63145 666 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 TTLL12Q14166 644 aaPredicted RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 RFTN1Q14699 578 aaPredicted RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 FAXCQ5TGI0 409 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 ANO5Q75V66 913 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 CATSPER4Q7RTX7 472 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 NOP9Q86U38 636 aaKnown RBP3.9□□□□□ -1.79
SHPRH-205ENST00000433355 APBA2Q99767 749 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 TRIM54Q9BYV2 358 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 SEMA6BQ9H3T3 888 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 GABBR1Q9UBS5 961 aa3.9□□□□□ -1.79
SHPRH-205ENST00000433355 OTOFQ9HC10 1997 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 TRIM66O15016 1216 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 DAB1O75553 588 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 HOXD8P13378 290 aaPredicted RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 RFC2P35250 354 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 GSTM5P46439 218 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 MAPKAPK2P49137 400 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 ACTN3Q08043 901 aaPredicted RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 RAD51AP2Q09MP3 1159 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 MUM1Q2TAK8 710 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 SAMD4BQ5PRF9 694 aaKnown RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 MFSD4BQ5TF39 518 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 MSANTD1Q6ZTZ1 278 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 SKAP1Q86WV1 359 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 PNMA5Q96PV4 448 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 NDEL1Q9GZM8 345 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 C1orf21Q9H246 121 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 CCNB1IP1Q9NPC3 277 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 RABL2AQ9UBK7 228 aaPredicted RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 CIDEBQ9UHD4 219 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 RABL2BQ9UNT1 228 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 NUB1Q9Y5A7 615 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 E9PMD0 336 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 GPD1P21695 349 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 KLRC1P26715 233 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 ANXA11P50995 505 aaKnown RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 CLNS1AP54105 237 aaKnown RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 DLG1Q12959 904 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 FBXO47Q5MNV8 452 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 IZUMO3Q5VZ72 239 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 CCDC25Q86WR0 208 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 ZSWIM2Q8NEG5 633 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 REPS2Q8NFH8 660 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 OVCA2Q8WZ82 227 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 RPAP3Q9H6T3 665 aaPredicted RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 CLIC5Q9NZA1 410 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 SAP30BPQ9UHR5 308 aaKnown RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 NEU2Q9Y3R4 380 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 BDP1A6H8Y1 2624 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 CCDC78A2IDD5 438 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 SLC9A3R1O14745 358 aaPredicted RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 CSNK2BP67870 215 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF200P98182 395 aaPredicted RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 IL23RQ5VWK5 629 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 LYPLAL1Q5VWZ2 237 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 KCTD1Q719H9 257 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 NELFCDQ8IXH7 590 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 RDH12Q96NR8 316 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 SELENOSQ9BQE4 189 aa3.89□□□□□ -1.79
SHPRH-205ENST00000433355 EIF2AQ9BY44 585 aaKnown RBP3.89□□□□□ -1.79
SHPRH-205ENST00000433355 SPATC1LQ9H0A9 340 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms