RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 MTCL1Q9Y4B5 1905 aaKnown RBP27.68■■■□□ 2.02
TMEM248-205ENST00000433271 TRIOBPQ9H2D6 2365 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 A0A1W2PQH9 124 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 CTAGE9A4FU28 777 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 FANCGO15287 622 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 NCAM1P13591 858 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 EPCAMP16422 314 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 DESP17661 470 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 SLC25A52Q3SY17 297 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 PPM1LQ5SGD2 360 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 SYPL2Q5VXT5 272 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 OVCA2Q8WZ82 227 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 NT5C3BQ969T7 300 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 CDCA3Q99618 268 aaPredicted RBP27.67■■■□□ 2.02
TMEM248-205ENST00000433271 NMUR1Q9HB89 426 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 HCFC2Q9Y5Z7 792 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 ZNF638Q14966 1978 aaKnown RBP27.67■■■□□ 2.02
TMEM248-205ENST00000433271 TMEM265A0A087WTH1 108 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 SPOPO43791 374 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 ZMYND10O75800 440 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 ZDHHC11BP0C7U3 371 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 PGFP49763 221 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 BTBD8Q5XKL5 378 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 ELMSAN1Q6PJG2 1045 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 PDZD8Q8NEN9 1154 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 EDEM1Q92611 657 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 PPP2R3CQ969Q6 453 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 NAPGQ99747 312 aaPredicted RBP27.67■■■□□ 2.02
TMEM248-205ENST00000433271 RRN3Q9NYV6 651 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 CLIC5Q9NZA1 410 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 STAP1Q9ULZ2 295 aa27.67■■■□□ 2.02
TMEM248-205ENST00000433271 COL4A4P53420 1690 aaPredicted RBP27.66■■■□□ 2.02
TMEM248-205ENST00000433271 ENC1O14682 589 aa27.66■■■□□ 2.02
TMEM248-205ENST00000433271 RNF8O76064 485 aa27.66■■■□□ 2.02
TMEM248-205ENST00000433271 NRIP1P48552 1158 aa27.66■■■□□ 2.02
TMEM248-205ENST00000433271 C15orf59Q2T9L4 293 aaPredicted RBP27.66■■■□□ 2.02
TMEM248-205ENST00000433271 CPNE8Q86YQ8 564 aa27.66■■■□□ 2.02
TMEM248-205ENST00000433271 ELMOD1Q8N336 334 aa27.66■■■□□ 2.02
TMEM248-205ENST00000433271 CENPIQ92674 756 aaPredicted RBP27.66■■■□□ 2.02
TMEM248-205ENST00000433271 NPY6RQ99463 290 aa27.66■■■□□ 2.02
TMEM248-205ENST00000433271 UXTQ9UBK9 157 aaPredicted RBP27.66■■■□□ 2.02
TMEM248-205ENST00000433271 USTQ9Y2C2 406 aa27.66■■■□□ 2.02
TMEM248-205ENST00000433271 ATG2AQ2TAZ0 1938 aa27.65■■■□□ 2.02
TMEM248-205ENST00000433271 HOXA9P31269 272 aa27.65■■■□□ 2.02
TMEM248-205ENST00000433271 ATP11AP98196 1134 aa27.65■■■□□ 2.02
TMEM248-205ENST00000433271 CC2D1AQ6P1N0 951 aaPredicted RBP27.65■■■□□ 2.02
TMEM248-205ENST00000433271 ZNF592Q92610 1267 aa27.65■■■□□ 2.02
TMEM248-205ENST00000433271 CD101Q93033 1021 aa27.65■■■□□ 2.02
TMEM248-205ENST00000433271 HES6Q96HZ4 224 aa27.65■■■□□ 2.02
TMEM248-205ENST00000433271 ZNF512Q96ME7 567 aaPredicted RBP27.65■■■□□ 2.02
TMEM248-205ENST00000433271 NCAPGQ9BPX3 1015 aa27.65■■■□□ 2.02
TMEM248-205ENST00000433271 TLR10Q9BXR5 811 aa27.65■■■□□ 2.02
TMEM248-205ENST00000433271 OSER1Q9NX31 292 aa27.65■■■□□ 2.02
TMEM248-205ENST00000433271 MYO16Q9Y6X6 1858 aa27.64■■■□□ 2.02
TMEM248-205ENST00000433271 SH3PXD2AQ5TCZ1 1133 aa27.64■■■□□ 2.02
TMEM248-205ENST00000433271 ARFGAP1Q8N6T3 406 aa27.64■■■□□ 2.02
TMEM248-205ENST00000433271 KIF18AQ8NI77 898 aa27.64■■■□□ 2.02
TMEM248-205ENST00000433271 MIF4GDA9UHW6 222 aaKnown RBP27.63■■■□□ 2.01
TMEM248-205ENST00000433271 LRCH4O75427 683 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 ATP1A1P05023 1023 aaKnown RBP27.63■■■□□ 2.01
TMEM248-205ENST00000433271 HNRNPA1P09651 372 aaKnown RBP eCLIP27.63■■■□□ 2.01
TMEM248-205ENST00000433271 PCK1P35558 622 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 PPP3CCP48454 512 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 RPS6KA1Q15418 735 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 CDO1Q16878 200 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 SNX30Q5VWJ9 437 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 DAB2IPQ5VWQ8 1189 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 STRADAQ7RTN6 431 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 FAM172AQ8WUF8 416 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 TBCBQ99426 244 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 PACSIN2Q9UNF0 486 aaPredicted RBP27.63■■■□□ 2.01
TMEM248-205ENST00000433271 NCK2O43639 380 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 RFPL2O75678 378 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 ENDOD1O94919 500 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 TFE3P19532 575 aaPredicted RBP27.63■■■□□ 2.01
TMEM248-205ENST00000433271 SULT1E1P49888 294 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 BNIPLQ7Z465 357 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 NSUN3Q9H649 340 aaKnown RBP27.63■■■□□ 2.01
TMEM248-205ENST00000433271 ZDHHC7Q9NXF8 308 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 TRPM5Q9NZQ8 1165 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 LMCD1Q9NZU5 365 aa27.63■■■□□ 2.01
TMEM248-205ENST00000433271 ZNF840PA6NDX5 716 aa27.62■■■□□ 2.01
TMEM248-205ENST00000433271 CCL16O15467 120 aa27.62■■■□□ 2.01
TMEM248-205ENST00000433271 RALAP11233 206 aa27.62■■■□□ 2.01
TMEM248-205ENST00000433271 KCNC3Q14003 757 aa27.62■■■□□ 2.01
TMEM248-205ENST00000433271 DNTTIP2Q5QJE6 756 aaKnown RBP27.62■■■□□ 2.01
TMEM248-205ENST00000433271 PAPD7Q5XG87 772 aaKnown RBP27.62■■■□□ 2.01
TMEM248-205ENST00000433271 RNF139Q8WU17 664 aa27.62■■■□□ 2.01
TMEM248-205ENST00000433271 PGAP3Q96FM1 320 aaPredicted RBP27.62■■■□□ 2.01
TMEM248-205ENST00000433271 ADAM33Q9BZ11 813 aa27.62■■■□□ 2.01
TMEM248-205ENST00000433271 TTYH1Q9H313 450 aaPredicted RBP27.62■■■□□ 2.01
TMEM248-205ENST00000433271 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.62■■■□□ 2.01
TMEM248-205ENST00000433271 M0QYT0 321 aa27.61■■■□□ 2.01
TMEM248-205ENST00000433271 RARGP13631 454 aa27.61■■■□□ 2.01
TMEM248-205ENST00000433271 CTNNA2P26232 953 aa27.61■■■□□ 2.01
TMEM248-205ENST00000433271 CTNNA1P35221 906 aaKnown RBP27.61■■■□□ 2.01
TMEM248-205ENST00000433271 SSR1P43307 286 aaKnown RBP27.61■■■□□ 2.01
TMEM248-205ENST00000433271 HDAC4P56524 1084 aa27.61■■■□□ 2.01
TMEM248-205ENST00000433271 PITX1P78337 314 aaPredicted RBP27.61■■■□□ 2.01
TMEM248-205ENST00000433271 PABPC1LQ4VXU2 614 aaKnown RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms