RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 PTPN13Q12923 2485 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 ZNF638Q14966 1978 aaKnown RBP16.77■□□□□ 0.28
NUP50-209ENST00000432340 ABCB4P21439 1286 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 TRAPPC10P48553 1259 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 DGKGP49619 791 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 GOLGA8FQ08AF8 430 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 VAC14Q08AM6 782 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 GOLGA8DPQ0D2H9 430 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 TAF10Q12962 218 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 HECTD3Q5T447 861 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 ADALQ6DHV7 355 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 FBXL19Q6PCT2 694 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 USP49Q70CQ1 688 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 DPH6Q7L8W6 267 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 TMEM25Q86YD3 366 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 CCDC83Q8IWF9 413 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 DHX40Q8IX18 779 aaKnown RBP16.77■□□□□ 0.28
NUP50-209ENST00000432340 SNRNP27Q8WVK2 155 aaKnown RBP16.77■□□□□ 0.28
NUP50-209ENST00000432340 C8orf48Q96LL4 319 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 BBS2Q9BXC9 721 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 DPH1Q9BZG8 443 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 SEMA4CQ9C0C4 833 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 GDAP2Q9NXN4 497 aa16.77■□□□□ 0.28
NUP50-209ENST00000432340 NEDD8-MDP1E9PL57 170 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 H0Y8X5 98 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 GABRDO14764 452 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 ITGAVP06756 1048 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 GLDCP23378 1020 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 ACOT2P49753 483 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 TUBP50607 506 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 USP46P62068 366 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 RAD51AP2Q09MP3 1159 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 XKR5Q6UX68 686 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 BBS7Q8IWZ6 715 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 IGSF22Q8N9C0 903 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 KCNE4Q8WWG9 221 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 TTC9Q92623 222 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 MYLPFQ96A32 169 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 ERLEC1Q96DZ1 483 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 SYT15Q9BQS2 421 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 ACE2Q9BYF1 805 aaPredicted RBP16.76■□□□□ 0.27
NUP50-209ENST00000432340 MKRN2Q9H000 416 aaKnown RBP16.76■□□□□ 0.27
NUP50-209ENST00000432340 TM9SF3Q9HD45 589 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 SEPT3Q9UH03 358 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 ODF2LQ9ULJ1 636 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 NOL7Q9UMY1 257 aaKnown RBP16.76■□□□□ 0.27
NUP50-209ENST00000432340 AGAP1Q9UPQ3 857 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.76■□□□□ 0.27
NUP50-209ENST00000432340 SNX9Q9Y5X1 595 aa16.76■□□□□ 0.27
NUP50-209ENST00000432340 A0A1B0GTQ1 180 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 K7ENM7 598 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 RTN3O95197 1032 aaPredicted RBP16.75■□□□□ 0.27
NUP50-209ENST00000432340 TYRP14679 529 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 BDNFP23560 247 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 CD27P26842 260 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 POLR2BP30876 1174 aaKnown RBP16.75■□□□□ 0.27
NUP50-209ENST00000432340 CTSKP43235 329 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 ACADVLP49748 655 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 BCAT1P54687 386 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 E2F1Q01094 437 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 POSTNQ15063 836 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 ANKRD1Q15327 319 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 TTC38Q5R3I4 469 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 ATG14Q6ZNE5 492 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 MARK1Q9P0L2 795 aa16.75■□□□□ 0.27
NUP50-209ENST00000432340 LSM7Q9UK45 103 aaKnown RBP16.75■□□□□ 0.27
NUP50-209ENST00000432340 AGO2Q9UKV8 859 aaKnown RBP16.75■□□□□ 0.27
NUP50-209ENST00000432340 PRRT4C9JH25 899 aa16.74■□□□□ 0.27
NUP50-209ENST00000432340 YWHAQP27348 245 aa16.74■□□□□ 0.27
NUP50-209ENST00000432340 ARRB1P49407 418 aaPredicted RBP16.74■□□□□ 0.27
NUP50-209ENST00000432340 ERVPABLB-1P60509 514 aa16.74■□□□□ 0.27
NUP50-209ENST00000432340 RBP5P82980 135 aa16.74■□□□□ 0.27
NUP50-209ENST00000432340 TFAMQ00059 246 aaKnown RBP16.74■□□□□ 0.27
NUP50-209ENST00000432340 SYT2Q8N9I0 419 aaPredicted RBP16.74■□□□□ 0.27
NUP50-209ENST00000432340 RFFLQ8WZ73 363 aa16.74■□□□□ 0.27
NUP50-209ENST00000432340 CPNE5Q9HCH3 593 aa16.74■□□□□ 0.27
NUP50-209ENST00000432340 ADAMTS1Q9UHI8 967 aa16.74■□□□□ 0.27
NUP50-209ENST00000432340 ITGA11Q9UKX5 1188 aa16.74■□□□□ 0.27
NUP50-209ENST00000432340 F8VP50 259 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 COCHO43405 550 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 CTDNEP1O95476 244 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 GP1BBP13224 206 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 FDPSP14324 419 aaKnown RBP16.73■□□□□ 0.27
NUP50-209ENST00000432340 CDH8P55286 799 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 GRIN1Q05586 938 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 MYCBPAPQ8TBZ2 947 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 FBXO32Q969P5 355 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 CCDC97Q96F63 343 aaPredicted RBP16.73■□□□□ 0.27
NUP50-209ENST00000432340 NAF1Q96HR8 494 aaKnown RBP16.73■□□□□ 0.27
NUP50-209ENST00000432340 HIC2Q96JB3 615 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 ELF4Q99607 663 aaPredicted RBP16.73■□□□□ 0.27
NUP50-209ENST00000432340 ELOVL4Q9GZR5 314 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 ANKMY1Q9P2S6 941 aa16.73■□□□□ 0.27
NUP50-209ENST00000432340 DENND4CQ5VZ89 1909 aa16.72■□□□□ 0.27
NUP50-209ENST00000432340 MUC22E2RYF6 1773 aaPredicted RBP16.72■□□□□ 0.27
NUP50-209ENST00000432340 KCNJ18B7U540 433 aa16.72■□□□□ 0.27
NUP50-209ENST00000432340 TRIM24O15164 1050 aa16.72■□□□□ 0.27
NUP50-209ENST00000432340 KLK10O43240 276 aa16.72■□□□□ 0.27
NUP50-209ENST00000432340 ITGB3P05106 788 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms