RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 RPL22P35268 128 aaKnown RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 ROR1Q01973 937 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 FAAP100Q0VG06 881 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 NOMO1Q15155 1222 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 C15orf59Q2T9L4 293 aaPredicted RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 FAM26DQ5JW98 314 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 TWF2Q6IBS0 349 aaKnown RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 SCYL2Q6P3W7 929 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 DARS2Q6PI48 645 aaKnown RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 PPP1R21Q6ZMI0 780 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 SLC26A9Q7LBE3 791 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 TADA2BQ86TJ2 420 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 FAM172AQ8WUF8 416 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 KBTBD7Q8WVZ9 684 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 ATXN2LQ8WWM7 1075 aaKnown RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 PRCCQ92733 491 aaPredicted RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDX56-204ENST00000431640 PWWP2AQ96N64 755 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 PEBP4Q96S96 227 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 FRMD8Q9BZ67 464 aaPredicted RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 UBN1Q9NPG3 1134 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 SLC38A7Q9NVC3 462 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 KLK14Q9P0G3 267 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 FETUBQ9UGM5 382 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 SCN1AP35498 2009 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 PIK3R2O00459 728 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 APOL1O14791 398 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 PDGFRBP09619 1106 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 ATP2A2P16615 1042 aaKnown RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 LILRA4P59901 499 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 TLE2Q04725 743 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 PDIA2Q13087 525 aaKnown RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 CBLBQ13191 982 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 TAF5Q15542 800 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 HIF1AQ16665 826 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 CDO1Q16878 200 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 TCTN1Q2MV58 587 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 C1orf53Q5VUE5 145 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 TRNP1Q6NT89 227 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 CYP4V2Q6ZWL3 525 aaPredicted RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 NAT8LQ8N9F0 302 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 SMG8Q8ND04 991 aaKnown RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 CENPIQ92674 756 aaPredicted RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 ZNF670Q9BS34 389 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 TMEM106CQ9BVX2 250 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 NSRP1Q9H0G5 558 aaKnown RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 NGRNQ9NPE2 291 aaKnown RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 SENP1Q9P0U3 644 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 SAE1Q9UBE0 346 aaPredicted RBP13.37□□□□□ -0.27
DDX56-204ENST00000431640 SLC24A2Q9UI40 661 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 NOD1Q9Y239 953 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 NME7Q9Y5B8 376 aa13.37□□□□□ -0.27
DDX56-204ENST00000431640 EXOC1LA0A1B0GW35 172 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 XPO1O14980 1071 aaKnown RBP13.36□□□□□ -0.27
DDX56-204ENST00000431640 GRAP2O75791 330 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 GHRP10912 638 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 BCAR1P56945 870 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 ATP11AP98196 1134 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 LPIN1Q14693 890 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 ANKRD20A8PQ5CZ79 823 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 SH3PXD2AQ5TCZ1 1133 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 ARHGEF18Q6ZSZ5 1173 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 UNC45BQ8IWX7 931 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 ZBED8Q8IZ13 594 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 ADGRF2Q8IZF7 708 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 CACNA2D3Q8IZS8 1091 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 PDIK1LQ8N165 341 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 OTUD6BQ8N6M0 293 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 PLD5Q8N7P1 536 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 PYROXD1Q8WU10 500 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 DYDC1Q8WWB3 177 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 CPT1BQ92523 772 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 VWCEQ96DN2 955 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 HNRNPABQ99729 332 aaKnown RBP13.36□□□□□ -0.27
DDX56-204ENST00000431640 PCDH18Q9HCL0 1135 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 TBX21Q9UL17 535 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
DDX56-204ENST00000431640 BCLAF3A2AJT9 711 aaKnown RBP13.35□□□□□ -0.27
DDX56-204ENST00000431640 E7ESA3 106 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 H7C0C1 242 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 SPTLC1O15269 473 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 MGEA5O60502 916 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 FGFR1P11362 822 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 BRAFP15056 766 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 DRD4P21917 467 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 LMO2P25791 158 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 ITGB8P26012 769 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 ADORA2BP29275 332 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 MAGEA9P43362 315 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 ATP5OP48047 213 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 NR2C2P49116 596 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 SLC18A1P54219 525 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 XRCC4Q13426 336 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 SLC9A4Q6AI14 798 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 STRADAQ7RTN6 431 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 PSTKQ8IV42 348 aaKnown RBP13.35□□□□□ -0.27
DDX56-204ENST00000431640 CCDC13Q8IYE1 715 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 ANKS4BQ8N8V4 417 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 FAM71DQ8N9W8 422 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms