RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 ACACAQ13085 2346 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 A8MXQ7 604 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 CACNG3O60359 315 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 GREM1O60565 184 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 TNNC1P63316 161 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 TOGARAM2Q6ZUX3 1019 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 PNPLA1Q8N8W4 532 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 SCAMP5Q8TAC9 235 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 MRGPRX1Q96LB2 322 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 KCNK16Q96T55 309 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 DNAJC17Q9NVM6 304 aaKnown RBP23.41■■□□□ 1.34
PTPRA-207ENST00000431048 CLIC4Q9Y696 253 aa23.41■■□□□ 1.34
PTPRA-207ENST00000431048 ATP8B3O60423 1300 aa23.4■■□□□ 1.34
PTPRA-207ENST00000431048 GRIK2Q13002 908 aa23.4■■□□□ 1.34
PTPRA-207ENST00000431048 SLCO6A1Q86UG4 719 aa23.4■■□□□ 1.34
PTPRA-207ENST00000431048 CCDC65Q8IXS2 484 aa23.4■■□□□ 1.34
PTPRA-207ENST00000431048 SCFD1Q8WVM8 642 aa23.4■■□□□ 1.34
PTPRA-207ENST00000431048 SCUBE2Q9NQ36 999 aa23.4■■□□□ 1.34
PTPRA-207ENST00000431048 DKK4Q9UBT3 224 aa23.4■■□□□ 1.34
PTPRA-207ENST00000431048 PCOLCE2Q9UKZ9 415 aa23.4■■□□□ 1.34
PTPRA-207ENST00000431048 PLXNB3Q9ULL4 1909 aa23.39■■□□□ 1.34
PTPRA-207ENST00000431048 A0A1B0GTW7 788 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 PRRT4C9JH25 899 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 NEFLP07196 543 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 ZNF883P0CG24 379 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 TNNI1P19237 187 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 ATICP31939 592 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 HOXD13P35453 343 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 SLC5A3P53794 718 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 PSMD6Q15008 389 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 PAQR9Q6ZVX9 377 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 CLIC6Q96NY7 704 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 CGRRF1Q99675 332 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.39■■□□□ 1.33
PTPRA-207ENST00000431048 APC2O95996 2303 aa23.39■■□□□ 1.33
PTPRA-207ENST00000431048 CISD3P0C7P0 127 aa23.38■■□□□ 1.33
PTPRA-207ENST00000431048 TYRP14679 529 aa23.38■■□□□ 1.33
PTPRA-207ENST00000431048 CD6P30203 668 aa23.38■■□□□ 1.33
PTPRA-207ENST00000431048 SNRNP35Q16560 246 aaKnown RBP23.38■■□□□ 1.33
PTPRA-207ENST00000431048 CADM4Q8NFZ8 388 aa23.38■■□□□ 1.33
PTPRA-207ENST00000431048 BBS2Q9BXC9 721 aa23.38■■□□□ 1.33
PTPRA-207ENST00000431048 KLF16Q9BXK1 252 aaPredicted RBP23.38■■□□□ 1.33
PTPRA-207ENST00000431048 XYLT2Q9H1B5 865 aa23.38■■□□□ 1.33
PTPRA-207ENST00000431048 DMAP1Q9NPF5 467 aaPredicted RBP23.38■■□□□ 1.33
PTPRA-207ENST00000431048 WSB2Q9NYS7 404 aaPredicted RBP23.38■■□□□ 1.33
PTPRA-207ENST00000431048 GMIPQ9P107 970 aa23.38■■□□□ 1.33
PTPRA-207ENST00000431048 MORC2Q9Y6X9 1032 aaPredicted RBP23.38■■□□□ 1.33
PTPRA-207ENST00000431048 DLATP10515 647 aaKnown RBP23.37■■□□□ 1.33
PTPRA-207ENST00000431048 STAT6P42226 847 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 ZNF132P52740 706 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 DBX2Q6ZNG2 339 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 TMPRSS7Q7RTY8 843 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 FAM35AQ86V20 835 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 SMARCD1Q96GM5 515 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 NACA2Q9H009 215 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 VRTNQ9H8Y1 702 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 CD93Q9NPY3 652 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 ITM2CQ9NQX7 267 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 FBXO10Q9UK96 956 aa23.37■■□□□ 1.33
PTPRA-207ENST00000431048 NEDD8-MDP1E9PL57 170 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 EIF3DO15371 548 aaKnown RBP eCLIP23.36■■□□□ 1.33
PTPRA-207ENST00000431048 TLR5O60602 858 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 DKK1O94907 266 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 IRF1P10914 325 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 MAOBP27338 520 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 MYL6P60660 151 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 SNRPFP62306 86 aaKnown RBP23.36■■□□□ 1.33
PTPRA-207ENST00000431048 CYP24A1Q07973 514 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 TRPC3Q13507 836 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 GLIS3Q8NEA6 775 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 ZNF507Q8TCN5 953 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 ZNF516Q92618 1163 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 SYAP1Q96A49 352 aaPredicted RBP23.36■■□□□ 1.33
PTPRA-207ENST00000431048 TNIP3Q96KP6 325 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 SLC6A17Q9H1V8 727 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.36■■□□□ 1.336e-7■■■■■ 78.3
PTPRA-207ENST00000431048 CACNA2D2Q9NY47 1150 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 USP36Q9P275 1121 aaKnown RBP23.36■■□□□ 1.33
PTPRA-207ENST00000431048 NXF1Q9UBU9 619 aaKnown RBP23.36■■□□□ 1.33
PTPRA-207ENST00000431048 RAD54BQ9Y620 910 aa23.36■■□□□ 1.33
PTPRA-207ENST00000431048 NPC1O15118 1278 aa23.35■■□□□ 1.33
PTPRA-207ENST00000431048 CD2BP2O95400 341 aaKnown RBP23.35■■□□□ 1.33
PTPRA-207ENST00000431048 DGKGP49619 791 aa23.35■■□□□ 1.33
PTPRA-207ENST00000431048 KIAA1324Q6UXG2 1013 aaKnown RBP23.35■■□□□ 1.33
PTPRA-207ENST00000431048 RDH13Q8NBN7 331 aa23.35■■□□□ 1.33
PTPRA-207ENST00000431048 BAHD1Q8TBE0 780 aaPredicted RBP23.35■■□□□ 1.33
PTPRA-207ENST00000431048 MDM1Q8TC05 714 aa23.35■■□□□ 1.33
PTPRA-207ENST00000431048 TOE1Q96GM8 510 aaKnown RBP23.35■■□□□ 1.33
PTPRA-207ENST00000431048 MED10Q9BTT4 135 aa23.35■■□□□ 1.33
PTPRA-207ENST00000431048 PANK2Q9BZ23 570 aa23.35■■□□□ 1.33
PTPRA-207ENST00000431048 FBXO44Q9H4M3 255 aa23.35■■□□□ 1.33
PTPRA-207ENST00000431048 TLR8Q9NR97 1041 aaKnown RBP23.35■■□□□ 1.33
PTPRA-207ENST00000431048 RAXQ9Y2V3 346 aa23.35■■□□□ 1.33
PTPRA-207ENST00000431048 PCDHGB2Q9Y5G2 931 aa23.35■■□□□ 1.33
PTPRA-207ENST00000431048 CELSR3Q9NYQ7 3312 aa23.35■■□□□ 1.33
PTPRA-207ENST00000431048 A0A087X0B3 334 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 TGFB1I1O43294 461 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 PGFP49763 221 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 ERICH6BQ5W0A0 696 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 IL27RAQ6UWB1 636 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms