RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 DENND2DQ9H6A0 471 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 AZI2Q9H6S1 392 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 FAM86C1Q9NVL1 165 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CPNE7Q9UBL6 633 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 DNMT3LQ9UJW3 386 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 WIZO95785 1651 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ADCY9O60503 1353 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 A0A1W2PRV1 198 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 BTBD17A6NE02 478 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TMEM114B3SHH9 223 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TOM1O60784 492 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CABYRO75952 493 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 SNRNP70P08621 437 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 UBTFL6P0CB48 400 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TRIM27P14373 513 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ITGA2P17301 1181 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 POLR2CP19387 275 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 EIF2AK2P19525 551 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 STARP49675 285 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 HNRNPMP52272 730 aaKnown RBP eCLIP5.55□□□□□ -1.522e-6■■■■□ 19.5
PTPN4-203ENST00000430976 DSC2Q02487 901 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TRAP1Q12931 704 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 UAP1Q16222 522 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CDKL4Q5MAI5 379 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MTFR2Q6P444 385 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 SULF1Q8IWU6 871 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TUSC5Q8IXB3 177 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TAGAPQ8N103 731 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 FSIP1Q8NA03 581 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ZBTB38Q8NAP3 1195 aaPredicted RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 LINS1Q8NG48 757 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 SLC22A18Q96BI1 424 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 CALML4Q96GE6 196 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 TMEM68Q96MH6 324 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 PIMREGQ9BSJ6 248 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 MFFQ9GZY8 342 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 NUP62CLQ9H1M0 184 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 LZTFL1Q9NQ48 299 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 EIF2B3Q9NR50 452 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 DNAJC17Q9NVM6 304 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 STX18Q9P2W9 335 aaKnown RBP5.55□□□□□ -1.52
PTPN4-203ENST00000430976 PI4KBQ9UBF8 816 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ZMYM5Q9UJ78 669 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 DNAJC16Q9Y2G8 782 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 GPR52Q9Y2T5 361 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 STARD13Q9Y3M8 1113 aa5.55□□□□□ -1.52
PTPN4-203ENST00000430976 ARHGEF11O15085 1522 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 URB2Q14146 1524 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 A0A1W2PQ72 361 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 TTC26A0AVF1 554 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 B8ZZF3 427 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 LIN7AO14910 233 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 XPO1O14980 1071 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 PFDN6O15212 129 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 EFCAB14O75071 495 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 KRT36O76013 467 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 MLYCDO95822 493 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ATP2A2P16615 1042 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SERPINB9P50453 376 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 PGDP52209 483 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 RPS26P62854 115 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 DPYDQ12882 1025 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 DHCR24Q15392 516 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ZACNQ401N2 412 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 FBXO46Q6PJ61 603 aaPredicted RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 TMEM108Q6UXF1 575 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SLC30A10Q6XR72 485 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 FAM196AQ6ZSG2 479 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF677Q86XU0 584 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SLC4A11Q8NBS3 891 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SPATA4Q8NEY3 305 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 RNASE11Q8TAA1 199 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SSH1Q8WYL5 1049 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 BAP1Q92560 729 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 HSPBAP1Q96EW2 488 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ZDHHC12Q96GR4 267 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 IMPG2Q9BZV3 1241 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 TMEM60Q9H2L4 133 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 DIABLOQ9NR28 239 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 MAN1C1Q9NR34 630 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 CHRAC1Q9NRG0 131 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 SNTG1Q9NSN8 517 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 INTS7Q9NVH2 962 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 PPARGC1AQ9UBK2 798 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 KCNN3Q9UGI6 736 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 KCND3Q9UK17 655 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 NFE2L3Q9Y4A8 694 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 V9GYQ6 96 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ACEP12821 1306 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 B4GALT4O60513 344 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ADH1CP00326 375 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ASGR1P07306 291 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 RNF224P0DH78 156 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 PRKAR1AP10644 381 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ATP12AP54707 1039 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ETF1P62495 437 aaKnown RBP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.54□□□□□ -1.52
PTPN4-203ENST00000430976 XKR3Q5GH77 459 aa5.54□□□□□ -1.52
PTPN4-203ENST00000430976 ZMYM1Q5SVZ6 1142 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms