RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 FAM20AQ96MK3 541 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 ZSWIM5Q9P217 1185 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 ITSN2Q9NZM3 1697 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 G3V2T6 193 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 RPS6KA5O75582 802 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 NUDT14O95848 222 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 MYBPC2Q14324 1141 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 GALNT3Q14435 633 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 AGKQ53H12 422 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 ARHGAP28Q9P2N2 729 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 HIST1H2ABP04908 130 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 HARS2P49590 506 aaKnown RBP16.93■□□□□ 0.3
RIF1-204ENST00000430328 PDPK2PQ6A1A2 396 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 HIST3H2AQ7L7L0 130 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 HIST1H2ACQ93077 130 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 CCDC3Q9BQI4 270 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 CHCHD6Q9BRQ6 235 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 O00370 1275 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 TSPAN4O14817 238 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 KATNA1O75449 491 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 PDE8BO95263 885 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 DEFB107AQ8IZN7 70 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 KBTBD7Q8WVZ9 684 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 CNKSR1Q969H4 720 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 TMEM117Q9H0C3 514 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 AHSPQ9NZD4 102 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 SNX9Q9Y5X1 595 aa16.93■□□□□ 0.3
RIF1-204ENST00000430328 NCF1BA6NI72 391 aaPredicted RBP16.92■□□□□ 0.3
RIF1-204ENST00000430328 NCF1CA8MVU1 366 aaPredicted RBP16.92■□□□□ 0.3
RIF1-204ENST00000430328 NCF1P14598 390 aaPredicted RBP16.92■□□□□ 0.3
RIF1-204ENST00000430328 LEMD2Q8NC56 503 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 CPA5Q8WXQ8 436 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 PUS7LQ9H0K6 701 aaKnown RBP16.92■□□□□ 0.3
RIF1-204ENST00000430328 POLR3FQ9H1D9 316 aaPredicted RBP16.92■□□□□ 0.3
RIF1-204ENST00000430328 KMOO15229 486 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 FDFT1P37268 417 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 TUBA3CQ13748 450 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 ATP6V1G2O95670 118 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 NR3C2P08235 984 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 DAW1Q8N136 415 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 MARCH10Q8NA82 808 aaPredicted RBP16.92■□□□□ 0.3
RIF1-204ENST00000430328 OR6Y1Q8NGX8 325 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 TEKT5Q96M29 485 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 RIBC2Q9H4K1 309 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 TBC1D24Q9ULP9 559 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 LLGL2Q6P1M3 1020 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 NUDT5Q9UKK9 219 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 L1RE1Q9UN81 338 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 KDM5AP29375 1690 aaKnown RBP16.92■□□□□ 0.3
RIF1-204ENST00000430328 ADGRL1O94910 1474 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 ARHGEF33A8MVX0 844 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 UQCRBP14927 111 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 CCNCP24863 283 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 TOP3AQ13472 1001 aaPredicted RBP16.92■□□□□ 0.3
RIF1-204ENST00000430328 TTLL4Q14679 1199 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 TRAPPC11Q7Z392 1133 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 DHRSXQ8N5I4 330 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 YEATS2Q9ULM3 1422 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 TADA2AO75478 443 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 IL12AP29459 219 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 STK32CQ86UX6 486 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 WDR24Q96S15 920 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 TEX13BQ9BXU2 312 aa16.92■□□□□ 0.3
RIF1-204ENST00000430328 TRIT1Q9H3H1 467 aaKnown RBP16.92■□□□□ 0.3
RIF1-204ENST00000430328 PTPN4P29074 926 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 ALDH9A1P49189 494 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 DGCR6Q14129 220 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 RAB11FIP2Q7L804 512 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 SLC22A9Q8IVM8 553 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 CINPQ9BW66 212 aaPredicted RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 ZNF224Q9NZL3 707 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 NCKIPSDQ9NZQ3 722 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 RB1P06400 928 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 IL2P60568 153 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 CENPCQ03188 943 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 ITGA9Q13797 1035 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 PFKFB3Q16875 520 aaPredicted RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 MARK2Q7KZI7 788 aaKnown RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 MYO1HQ8N1T3 1032 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 PROX1Q92786 737 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 ISCUQ9H1K1 167 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 MARK1Q9P0L2 795 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 CCDC154A6NI56 674 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 FOSL1P15407 271 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 NT5C2P49902 561 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 ZNF512Q96ME7 567 aaPredicted RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 GPN1Q9HCN4 374 aaPredicted RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 ADPRHL2Q9NX46 363 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 POTEMA6NI47 508 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 CHN2P52757 468 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 INO80DQ53TQ3 878 aaPredicted RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 FBXO31Q5XUX0 539 aaPredicted RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 UBE2Q1Q7Z7E8 422 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 RIN2Q8WYP3 895 aaPredicted RBP16.91■□□□□ 0.3
RIF1-204ENST00000430328 CLEC4AQ9UMR7 237 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 PRRG1O14668 218 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 CYP21A2P08686 494 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 CNTFP26441 200 aa16.91■□□□□ 0.3
RIF1-204ENST00000430328 ACADSBP45954 432 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms