RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 VAMP7P51809 220 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 MAP3K7CLP57077 242 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 KRT85P78386 507 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 ST3GAL2Q16842 350 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 ANO4Q32M45 955 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 KLHDC10Q6PID8 442 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 CLEC20AQ6ZU45 233 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 HTR3DQ70Z44 454 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 HMGB4Q8WW32 186 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 SPATA32Q96LK8 384 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 HNRNPABQ99729 332 aaKnown RBP15.73■□□□□ 0.11
MSH5-208ENST00000429846 CYP3A43Q9HB55 503 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 TMEM9BQ9NQ34 198 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 LSM7Q9UK45 103 aaKnown RBP15.73■□□□□ 0.11
MSH5-208ENST00000429846 SCML2Q9UQR0 700 aa15.73■□□□□ 0.11
MSH5-208ENST00000429846 TCRBV21S2A2A0A5A6 115 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 C4orf47A7E2U8 309 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 MAP3K13O43283 966 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 CACNG3O60359 315 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 IRF1P10914 325 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 RPL13P26373 211 aaKnown RBP15.72■□□□□ 0.11
MSH5-208ENST00000429846 ADORA2BP29275 332 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 HOXD12P35452 270 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 SYKP43405 635 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 LMAN2Q12907 356 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 ORC1Q13415 861 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 C1orf220Q5T0J3 134 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 C10orf76Q5T2E6 689 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 EMC10Q5UCC4 262 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 SPOPLQ6IQ16 392 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 PSAPL1Q6NUJ1 521 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 C12orf29Q8N999 325 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 CCDC150Q8NCX0 1101 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 ELMO3Q96BJ8 720 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 CHAMP1Q96JM3 812 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 XPO6Q96QU8 1125 aaKnown RBP15.72■□□□□ 0.11
MSH5-208ENST00000429846 NT5C1AQ9BXI3 368 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 KLF16Q9BXK1 252 aaPredicted RBP15.72■□□□□ 0.11
MSH5-208ENST00000429846 NIF3L1Q9GZT8 377 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.72■□□□□ 0.11
MSH5-208ENST00000429846 MARK1Q9P0L2 795 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 STARD13Q9Y3M8 1113 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 CEP192Q8TEP8 1941 aa15.72■□□□□ 0.11
MSH5-208ENST00000429846 PI4KAP42356 2102 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 FAM237AA0A1B0GTK4 181 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 GREM1O60565 184 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 KRT13P13646 458 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 PSEN1P49768 467 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 NOVA1P51513 510 aaKnown RBP15.71■□□□□ 0.11
MSH5-208ENST00000429846 MAP7D1Q3KQU3 841 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 GRAMD4Q6IC98 578 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 TADA2BQ86TJ2 420 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 TMEM25Q86YD3 366 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 SYT12Q8IV01 421 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 PGBD3Q8N328 593 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 GUF1Q8N442 669 aaKnown RBP15.71■□□□□ 0.11
MSH5-208ENST00000429846 NAT16Q8N8M0 369 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 RLN3Q8WXF3 142 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 PIGKQ92643 395 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 CYFIP2Q96F07 1278 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 FAXDC2Q96IV6 333 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 DNAJC17Q9NVM6 304 aaKnown RBP15.71■□□□□ 0.11
MSH5-208ENST00000429846 WDR35Q9P2L0 1181 aa15.71■□□□□ 0.11
MSH5-208ENST00000429846 CIZ1Q9ULV3 898 aaPredicted RBP15.71■□□□□ 0.11
MSH5-208ENST00000429846 USP24Q9UPU5 2620 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 HHLA1C9JL84 531 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 NEDD8-MDP1E9PL57 170 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 ZBTB24O43167 697 aaPredicted RBP15.7■□□□□ 0.1
MSH5-208ENST00000429846 CYP26A1O43174 497 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 AP5Z1O43299 807 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 CILPO75339 1184 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 HOXB2P14652 356 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 CSRP1P21291 193 aaKnown RBP15.7■□□□□ 0.1
MSH5-208ENST00000429846 ACO1P21399 889 aaKnown RBP15.7■□□□□ 0.1
MSH5-208ENST00000429846 NTSR1P30989 418 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 PGFP49763 221 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 TRIM61Q5EBN2 209 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 PEAR1Q5VY43 1037 aaPredicted RBP15.7■□□□□ 0.1
MSH5-208ENST00000429846 LYSMD4Q5XG99 296 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 GPRIN1Q7Z2K8 1008 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 FAM186BQ8IYM0 893 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 ZNF276Q8N554 614 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 TTC39CQ8N584 583 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 WBP2Q969T9 261 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 TWNKQ96RR1 684 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 CDK5RAP1Q96SZ6 601 aaKnown RBP15.7■□□□□ 0.1
MSH5-208ENST00000429846 BBS2Q9BXC9 721 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 NUSAP1Q9BXS6 441 aaKnown RBP15.7■□□□□ 0.1
MSH5-208ENST00000429846 FAM124BQ9H5Z6 455 aaPredicted RBP15.7■□□□□ 0.1
MSH5-208ENST00000429846 TMEM8AQ9HCN3 771 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 DNMT3LQ9UJW3 386 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 ATP6V1DQ9Y5K8 247 aa15.7■□□□□ 0.1
MSH5-208ENST00000429846 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.69■□□□□ 0.1
MSH5-208ENST00000429846 PATE3B3GLJ2 98 aa15.69■□□□□ 0.1
MSH5-208ENST00000429846 CDX4O14627 284 aaPredicted RBP15.69■□□□□ 0.1
MSH5-208ENST00000429846 TBX18O95935 607 aa15.69■□□□□ 0.1
MSH5-208ENST00000429846 TRIM49P0CI25 452 aa15.69■□□□□ 0.1
MSH5-208ENST00000429846 TRIM49CP0CI26 452 aa15.69■□□□□ 0.1
MSH5-208ENST00000429846 CEACAM1P13688 526 aa15.69■□□□□ 0.1
MSH5-208ENST00000429846 TYRP14679 529 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms