RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 POPDC2Q9HBU9 364 aa13.84□□□□□ -0.19
SNRNP200-202ENST00000429650 FBXO6Q9NRD1 293 aaPredicted RBP13.84□□□□□ -0.19
SNRNP200-202ENST00000429650 DONSONQ9NYP3 566 aa13.84□□□□□ -0.19
SNRNP200-202ENST00000429650 A0A087WZ62 844 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 CXorf49A8MYA2 514 aaPredicted RBP13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 APOL1O14791 398 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 CCDC22O60826 627 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 ENTPD5O75356 428 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 IL1BP01584 269 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 TGM2P21980 687 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 IGBP1P78318 339 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 TMEM132DQ14C87 1099 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 TAF11Q15544 211 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 SCYL2Q6P3W7 929 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 POTEAQ6S8J7 498 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 CAND1Q86VP6 1230 aaKnown RBP13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 CTAGE3PQ8IX95 158 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 PPP1R16BQ96T49 567 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 FDXACB1Q9BRP7 624 aaPredicted RBP13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 MIS12Q9H081 205 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 PCDH18Q9HCL0 1135 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 HEY1Q9Y5J3 304 aa13.83□□□□□ -0.19
SNRNP200-202ENST00000429650 PAPPA2Q9BXP8 1791 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 DPYSL4O14531 572 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 COPEO14579 308 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 ZBED1O96006 694 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 RGS7P49802 495 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 BCAR1P56945 870 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 BOLA3Q53S33 107 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 SLC9A4Q6AI14 798 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 C12orf29Q8N999 325 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 PCDH19Q8TAB3 1148 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 FBXO41Q8TF61 875 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 BTBD10Q9BSF8 475 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 TUBB6Q9BUF5 446 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 NGRNQ9NPE2 291 aaKnown RBP13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 ETNK2Q9NVF9 386 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 ZC3H7BQ9UGR2 993 aaKnown RBP13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 ZNF180Q9UJW8 692 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 SUFUQ9UMX1 484 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 RPS6KL1Q9Y6S9 549 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 OTOFQ9HC10 1997 aa13.83□□□□□ -0.2
SNRNP200-202ENST00000429650 BCLAF3A2AJT9 711 aaKnown RBP13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 KLF11O14901 512 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 ECM2O94769 699 aaPredicted RBP13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 MAP3K6O95382 1288 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 SLC25A27O95847 323 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 SNRPAP09012 282 aaKnown RBP13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 TXNP10599 105 aaKnown RBP13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 OSBPP22059 807 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 PRKCHP24723 683 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 MAGEA6P43360 314 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 BAG6P46379 1132 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 ZBTB16Q05516 673 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 POU5F1BQ06416 359 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 FOXD4Q12950 439 aaPredicted RBP13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 CA9Q16790 459 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 GOLGA7BQ2TAP0 167 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 RFWD3Q6PCD5 774 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 C4orf50Q6ZRC1 276 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 TEKT4Q8WW24 435 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 NAF1Q96HR8 494 aaKnown RBP13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 NSL1Q96IY1 281 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 NT5C1AQ9BXI3 368 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 KLC2Q9H0B6 622 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 ITGA11Q9UKX5 1188 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 KIAA1257Q9ULG3 409 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 LRRC42Q9Y546 428 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 CITO14578 2027 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 TRIP11Q15643 1979 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 DNAJC25-GNG10A0A024R161 153 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 C2orf71A6NGG8 1288 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 H0Y3Z8 333 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 KIF1CO43896 1103 aaKnown RBP13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 KRT37O76014 449 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 APRTP07741 180 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 ARF4P18085 180 aaPredicted RBP13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 CDC25CP30307 473 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 OLFML1Q6UWY5 402 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 FAM172AQ8WUF8 416 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 USP6NLQ92738 828 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 SNRNP25Q9BV90 132 aaKnown RBP13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 IQCGQ9H095 443 aaKnown RBP13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 TXNRD2Q9NNW7 524 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 PDGFCQ9NRA1 345 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 SMYD2Q9NRG4 433 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 ERAP1Q9NZ08 941 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 CSADQ9Y600 493 aa13.82□□□□□ -0.2
SNRNP200-202ENST00000429650 TRDMT1O14717 391 aaKnown RBP13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 STAU1O95793 577 aaKnown RBP13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 MYL2P10916 166 aa13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 INSRRP14616 1297 aa13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 RBP5P82980 135 aa13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 PMF1Q6P1K2 205 aa13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 CCDC110Q8TBZ0 833 aa13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 LRRN4Q8WUT4 740 aa13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 ITFG2Q969R8 447 aa13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 DPP3Q9NY33 737 aa13.81□□□□□ -0.2
SNRNP200-202ENST00000429650 PLLPQ9Y342 182 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms