RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 DEFB128Q7Z7B8 93 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 ADGRF2Q8IZF7 708 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 DAGLBQ8NCG7 672 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 ZSCAN18Q8TBC5 510 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-208ENST00000428599 VPS33AQ96AX1 596 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 C17orf75Q9HAS0 396 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.22□□□□□ -0.93
CTNND1-208ENST00000428599 MMRN1Q13201 1228 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 CCDC144BQ3MJ40 725 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 LRRC8DQ7L1W4 858 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 NLRP9Q7RTR0 991 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 CCNJLQ8IV13 435 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 FBXO16Q8IX29 292 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-208ENST00000428599 RIBC1Q8N443 379 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-208ENST00000428599 GALNT4Q8N4A0 578 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 E2F7Q96AV8 911 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 TLR8Q9NR97 1041 aaKnown RBP9.22□□□□□ -0.93
CTNND1-208ENST00000428599 TUBE1Q9UJT0 475 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 KIAA1257Q9ULG3 409 aa9.22□□□□□ -0.93
CTNND1-208ENST00000428599 FAM205AQ6ZU69 1335 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 PDZK1P1A8MUH7 402 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 ADM5C9JUS6 153 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 MTA2O94776 668 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 SUPT7LO94864 414 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 NUDT14O95848 222 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 SERPINB1P30740 379 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 GRK4P32298 578 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 FEN1P39748 380 aaKnown RBP9.21□□□□□ -0.93
CTNND1-208ENST00000428599 HALP42357 657 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 STK4Q13043 487 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 GNA13Q14344 377 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 SMTNL2Q2TAL5 461 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 KLHL24Q6TFL4 600 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 ADSSL1Q8N142 457 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 FAM71DQ8N9W8 422 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 SERPINB12Q96P63 405 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 GLIS2Q9BZE0 524 aaPredicted RBP9.21□□□□□ -0.93
CTNND1-208ENST00000428599 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 NKRFO15226 690 aaKnown RBP eCLIP9.21□□□□□ -0.93
CTNND1-208ENST00000428599 RBP3P10745 1247 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 CYP2A7P20853 494 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 HSPA13P48723 471 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 TRIM32Q13049 653 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 DAB2IPQ5VWQ8 1189 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 FBXO38Q6PIJ6 1188 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 MACC1Q6ZN28 852 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 TRMT11Q7Z4G4 463 aaKnown RBP9.21□□□□□ -0.93
CTNND1-208ENST00000428599 B3GALNT2Q8NCR0 500 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 SLC4A9Q96Q91 983 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 GINS4Q9BRT9 223 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 TMEM39AQ9NV64 488 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 TRPC4Q9UBN4 977 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 NR2E3Q9Y5X4 410 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 ADGRG1Q9Y653 693 aa9.21□□□□□ -0.93
CTNND1-208ENST00000428599 A0A088AWK7 358 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 NDUFS2O75306 463 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 THP07101 528 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 UCHL3P15374 230 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 PSMC3P17980 439 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF10P21506 573 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-208ENST00000428599 MAGEA4P43358 317 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 PPIL2Q13356 520 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 ELOA2Q8IYF1 753 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-208ENST00000428599 S100A13Q99584 98 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 CGRRF1Q99675 332 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 FHDC1Q9C0D6 1143 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-208ENST00000428599 EPC1Q9H2F5 836 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 SAE1Q9UBE0 346 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-208ENST00000428599 A0A087WZ62 844 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 TBKBP1A7MCY6 615 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 CAPN1P07384 714 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 HNRNPCP07910 306 aaKnown RBP eCLIP9.21□□□□□ -0.949e-7■■■■□ 20.8
CTNND1-208ENST00000428599 SERPINB8P50452 374 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 CHI3L2Q15782 390 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 AMHR2Q16671 573 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 DACT2Q5SW24 774 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 SERAC1Q96JX3 654 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 SH3GL1Q99961 368 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 ILKAPQ9H0C8 392 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-208ENST00000428599 C3P01024 1663 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 MYO5BQ9ULV0 1848 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 TCRBV5S4A2TA0A5A2 114 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 ENDOD1O94919 500 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 STAU1O95793 577 aaKnown RBP9.21□□□□□ -0.94
CTNND1-208ENST00000428599 DNAJB2P25686 324 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 NOS3P29474 1203 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 RAB27AP51159 221 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 TAF13Q15543 124 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 GLRA4Q5JXX5 417 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 FAM45BPQ6NSW5 357 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 PRPF39Q86UA1 669 aaKnown RBP9.21□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF655Q8N720 491 aaPredicted RBP9.21□□□□□ -0.94
CTNND1-208ENST00000428599 USP7Q93009 1102 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 THTPAQ9BU02 230 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 ELOVL6Q9H5J4 265 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 MANSC1Q9H8J5 431 aa9.21□□□□□ -0.94
CTNND1-208ENST00000428599 UBR1Q8IWV7 1749 aa9.2□□□□□ -0.94
CTNND1-208ENST00000428599 CBX4O00257 560 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms