RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 DCLK1O15075 740 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 HOXC11O43248 304 aaPredicted RBP28.71■■■□□ 2.19
LMO1-202ENST00000428101 EPN2O95208 641 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 ATP5C1P36542 298 aaKnown RBP28.71■■■□□ 2.19
LMO1-202ENST00000428101 GRIA2P42262 883 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 RAD23BP54727 409 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 KDSRQ06136 332 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 PLK5Q496M5 336 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 EMC10Q5UCC4 262 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 RTKNQ9BST9 563 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.71■■■□□ 2.19
LMO1-202ENST00000428101 COQ4Q9Y3A0 265 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 USP3Q9Y6I4 520 aa28.71■■■□□ 2.19
LMO1-202ENST00000428101 SPTBN2O15020 2390 aa28.7■■■□□ 2.19
LMO1-202ENST00000428101 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.7■■■□□ 2.18
LMO1-202ENST00000428101 HNRNPLP14866 589 aaKnown RBP eCLIP28.7■■■□□ 2.18
LMO1-202ENST00000428101 KIR2DL1P43626 348 aaPredicted RBP28.7■■■□□ 2.18
LMO1-202ENST00000428101 DGKEP52429 567 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 CRY1Q16526 586 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 DCAF17Q5H9S7 520 aaPredicted RBP28.7■■■□□ 2.18
LMO1-202ENST00000428101 KLHDC10Q6PID8 442 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 TMEM92Q6UXU6 159 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 SCD5Q86SK9 330 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 RASSF3Q86WH2 238 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 TTC39CQ8N584 583 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 ALLCQ8N6M5 410 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 NAT16Q8N8M0 369 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 IL17RCQ8NAC3 791 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 NETO1Q8TDF5 533 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 TMEM176AQ96HP8 235 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 DNAI2Q9GZS0 605 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 DUSP15Q9H1R2 295 aaPredicted RBP28.7■■■□□ 2.18
LMO1-202ENST00000428101 NUDT5Q9UKK9 219 aa28.7■■■□□ 2.18
LMO1-202ENST00000428101 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.69■■■□□ 2.18
LMO1-202ENST00000428101 MDM4O15151 490 aa28.69■■■□□ 2.18
LMO1-202ENST00000428101 GDF9O60383 454 aa28.69■■■□□ 2.18
LMO1-202ENST00000428101 RARGP13631 454 aa28.69■■■□□ 2.18
LMO1-202ENST00000428101 TIE1P35590 1138 aa28.69■■■□□ 2.18
LMO1-202ENST00000428101 TNFRSF4P43489 277 aa28.69■■■□□ 2.18
LMO1-202ENST00000428101 CCDC6Q16204 474 aa28.69■■■□□ 2.18
LMO1-202ENST00000428101 TCERG1LQ5VWI1 586 aa28.69■■■□□ 2.18
LMO1-202ENST00000428101 CCDC186Q7Z3E2 898 aa28.69■■■□□ 2.18
LMO1-202ENST00000428101 TULP3O75386 442 aa28.68■■■□□ 2.18
LMO1-202ENST00000428101 KLF8O95600 359 aaPredicted RBP28.68■■■□□ 2.18
LMO1-202ENST00000428101 LRRC63Q05C16 580 aa28.68■■■□□ 2.18
LMO1-202ENST00000428101 ANO4Q32M45 955 aa28.68■■■□□ 2.18
LMO1-202ENST00000428101 BTBD8Q5XKL5 378 aa28.68■■■□□ 2.18
LMO1-202ENST00000428101 TXNDC5Q8NBS9 432 aaKnown RBP28.68■■■□□ 2.18
LMO1-202ENST00000428101 FAM124BQ9H5Z6 455 aaPredicted RBP28.68■■■□□ 2.18
LMO1-202ENST00000428101 DCDC2BA2VCK2 349 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 SGK1O00141 431 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 SLC30A4O14863 429 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 ZNF806P0C7X5 589 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 HSF5Q4G112 596 aaPredicted RBP28.67■■■□□ 2.18
LMO1-202ENST00000428101 PLA2G2CQ5R387 149 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 ARHGAP17Q68EM7 881 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 ANO7Q6IWH7 933 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 ELOA2Q8IYF1 753 aaPredicted RBP28.67■■■□□ 2.18
LMO1-202ENST00000428101 ZNF276Q8N554 614 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 MDGA1Q8NFP4 955 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 SLC35C1Q96A29 364 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 CNOT6LQ96LI5 555 aaKnown RBP28.67■■■□□ 2.18
LMO1-202ENST00000428101 GTPBP4Q9BZE4 634 aaKnown RBP28.67■■■□□ 2.18
LMO1-202ENST00000428101 TPSD1Q9BZJ3 242 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 ZDHHC4Q9NPG8 344 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 HOOK1Q9UJC3 728 aaKnown RBP28.67■■■□□ 2.18
LMO1-202ENST00000428101 DNMT3LQ9UJW3 386 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 NAGPAQ9UK23 515 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 INVSQ9Y283 1065 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 PCDHGA5Q9Y5G8 931 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 NCOR2Q9Y618 2525 aa28.67■■■□□ 2.18
LMO1-202ENST00000428101 TRIM24O15164 1050 aa28.66■■■□□ 2.18
LMO1-202ENST00000428101 FOXD2O60548 495 aaPredicted RBP28.66■■■□□ 2.18
LMO1-202ENST00000428101 ADAM23O75077 832 aa28.66■■■□□ 2.18
LMO1-202ENST00000428101 SF3A2Q15428 464 aaKnown RBP28.66■■■□□ 2.18
LMO1-202ENST00000428101 ISM2Q6H9L7 571 aa28.66■■■□□ 2.18
LMO1-202ENST00000428101 UBXN6Q9BZV1 441 aa28.66■■■□□ 2.18
LMO1-202ENST00000428101 DEC1Q9P2X7 70 aa28.66■■■□□ 2.18
LMO1-202ENST00000428101 ARMCX3Q9UH62 379 aaPredicted RBP28.66■■■□□ 2.18
LMO1-202ENST00000428101 MAN1B1Q9UKM7 699 aa28.66■■■□□ 2.18
LMO1-202ENST00000428101 LAMA1P25391 3075 aa28.66■■■□□ 2.18
LMO1-202ENST00000428101 THADAQ6YHU6 1953 aa28.66■■■□□ 2.18
LMO1-202ENST00000428101 TBC1D3BA6NDS4 549 aa28.65■■■□□ 2.18
LMO1-202ENST00000428101 CD44P16070 742 aaKnown RBP28.65■■■□□ 2.18
LMO1-202ENST00000428101 PLA2G4AP47712 749 aa28.65■■■□□ 2.18
LMO1-202ENST00000428101 PSEN1P49768 467 aa28.65■■■□□ 2.18
LMO1-202ENST00000428101 GOLGA8FQ08AF8 430 aa28.65■■■□□ 2.18
LMO1-202ENST00000428101 GOLGA8DPQ0D2H9 430 aa28.65■■■□□ 2.18
LMO1-202ENST00000428101 RAB41Q5JT25 222 aa28.65■■■□□ 2.18
LMO1-202ENST00000428101 C10orf120Q5SQS8 335 aa28.65■■■□□ 2.18
LMO1-202ENST00000428101 Q6ZNB5 142 aa28.65■■■□□ 2.18
LMO1-202ENST00000428101 LSM7Q9UK45 103 aaKnown RBP28.65■■■□□ 2.18
LMO1-202ENST00000428101 HCN2Q9UL51 889 aa28.65■■■□□ 2.18
LMO1-202ENST00000428101 NUP205Q92621 2012 aa28.65■■■□□ 2.18
LMO1-202ENST00000428101 CUL2Q13617 745 aa28.64■■■□□ 2.18
LMO1-202ENST00000428101 USP39Q53GS9 565 aaKnown RBP28.64■■■□□ 2.18
LMO1-202ENST00000428101 PIGZQ86VD9 579 aa28.64■■■□□ 2.18
LMO1-202ENST00000428101 TERB1Q8NA31 727 aa28.64■■■□□ 2.18
LMO1-202ENST00000428101 ANKRD52Q8NB46 1076 aa28.64■■■□□ 2.18
LMO1-202ENST00000428101 DHTKD1Q96HY7 919 aaPredicted RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms