RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 TMEM30AQ9NV96 361 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 HMGXB4Q9UGU5 601 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 MAN1B1Q9UKM7 699 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 PIEZO2Q9H5I5 2752 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 FAM221BA6H8Z2 402 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 RNF40O75150 1001 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 RTN3O95197 1032 aaPredicted RBP13.46□□□□□ -0.25
SGCE-203ENST00000425444 APBB3O95704 486 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 HDCP19113 662 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 YWHAQP27348 245 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 ANP32AP39687 249 aaKnown RBP13.46□□□□□ -0.25
SGCE-203ENST00000425444 PPP1R2P41236 205 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 PPP3CCP48454 512 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 IFNAR2P48551 515 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 TAF10Q12962 218 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 USP4Q13107 963 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 ZNF77Q15935 545 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 TMEM196Q5HYL7 178 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 KLHL10Q6JEL2 608 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 FSTL4Q6MZW2 842 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 ELOA2Q8IYF1 753 aaPredicted RBP13.46□□□□□ -0.25
SGCE-203ENST00000425444 FBXL13Q8NEE6 735 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 KCNK16Q96T55 309 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 NT5C1AQ9BXI3 368 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 EBF3Q9H4W6 596 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 CYP3A43Q9HB55 503 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 CHMP5Q9NZZ3 219 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 PTPRDP23468 1912 aa13.46□□□□□ -0.25
SGCE-203ENST00000425444 ZNF840PA6NDX5 716 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 BIN1O00499 593 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 FAM200BP0CF97 657 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 ARSAP15289 507 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 PFKLP17858 780 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 ADORA2BP29275 332 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 DGKEP52429 567 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 SLC5A3P53794 718 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 PMS1P54277 932 aaKnown RBP13.45□□□□□ -0.26
SGCE-203ENST00000425444 INCA1Q0VD86 236 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 C19orf57Q0VDD7 668 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 LMAN2Q12907 356 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 RUNX3Q13761 415 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 PDGFRLQ15198 375 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 PMS2CLQ68D20 193 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 FUKQ8N0W3 1084 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 CPA6Q8N4T0 437 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 C12orf29Q8N999 325 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 PDZD8Q8NEN9 1154 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 RIN3Q8TB24 985 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 SH3RF2Q8TEC5 729 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 PIGKQ92643 395 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 FBXO32Q969P5 355 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 DHTKD1Q96HY7 919 aaPredicted RBP13.45□□□□□ -0.26
SGCE-203ENST00000425444 TWNKQ96RR1 684 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 FAM83CQ9BQN1 747 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 CCDC86Q9H6F5 360 aaKnown RBP13.45□□□□□ -0.26
SGCE-203ENST00000425444 HPS4Q9NQG7 708 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 RAB20Q9NX57 234 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 DUS2Q9NX74 493 aaKnown RBP13.45□□□□□ -0.26
SGCE-203ENST00000425444 GCNT4Q9P109 453 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 ARMCX3Q9UH62 379 aaPredicted RBP13.45□□□□□ -0.26
SGCE-203ENST00000425444 ARHGAP26Q9UNA1 814 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 GOLGA4Q13439 2230 aaKnown RBP13.45□□□□□ -0.26
SGCE-203ENST00000425444 DENND4CQ5VZ89 1909 aa13.45□□□□□ -0.26
SGCE-203ENST00000425444 EGFP01133 1207 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 DHPSP49366 369 aaPredicted RBP13.44□□□□□ -0.26
SGCE-203ENST00000425444 MAP3K7CLP57077 242 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 AMPD2Q01433 879 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 CCDC40Q4G0X9 1142 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 CBWD6Q4V339 395 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 ZNF394Q53GI3 561 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 USP39Q53GS9 565 aaKnown RBP13.44□□□□□ -0.26
SGCE-203ENST00000425444 TRIM61Q5EBN2 209 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 CBWD3Q5JTY5 395 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 CBWD5Q5RIA9 395 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 PAQR9Q6ZVX9 377 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 PIP4P1Q86T03 277 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 C11orf74Q86VG3 221 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 ZC3H3Q8IXZ2 948 aaKnown RBP13.44□□□□□ -0.26
SGCE-203ENST00000425444 CRYBG2Q8N1P7 616 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 OSCP1Q8WVF1 389 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 OVCA2Q8WZ82 227 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 SEMA4DQ92854 862 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 ATP2A3Q93084 1043 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 JAKMIP2Q96AA8 810 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 NUSAP1Q9BXS6 441 aaKnown RBP13.44□□□□□ -0.26
SGCE-203ENST00000425444 SMPD4Q9NXE4 827 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 EBF1Q9UH73 591 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 CTNND2Q9UQB3 1225 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 CPQQ9Y646 472 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 WNT6Q9Y6F9 365 aa13.44□□□□□ -0.26
SGCE-203ENST00000425444 ZNF638Q14966 1978 aaKnown RBP13.43□□□□□ -0.26
SGCE-203ENST00000425444 BICDL2A1A5D9 508 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 CYSRT1A8MQ03 144 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 LEFTY2O00292 366 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 TRDMT1O14717 391 aaKnown RBP13.43□□□□□ -0.26
SGCE-203ENST00000425444 CILPO75339 1184 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 MBL2P11226 248 aaPredicted RBP13.43□□□□□ -0.26
SGCE-203ENST00000425444 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
SGCE-203ENST00000425444 UBE2HP62256 183 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 ZNF423Q2M1K9 1284 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms